Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1417 |
Symbol | |
ID | 8132356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1658398 |
End bp | 1660062 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644864707 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_003016999 |
Protein GI | 253687809 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.37293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTT TTAAAAATAT AAAAATTGGA AATAGACTTG CTCTTGGCTT TGGTTTGCTA ATCATATTGA CATTGGTTTT GTCATCTGTG GGCTATTATT TTATGAAGGA TATTGGCACC GAAGTTGATG AGATCACTGA AGATAGAATG GTGAAGGTTG ATATGTTGCG TGATATTCAA GATATCTTGA ATACCAATGT TCGTACTTTG CGCGATATTA TCCTCCTCCC TGCCGACAGA AATCAGGAAA AACAGGCGCT GAGGGCGGTC ATCGTAAAAA CGACTAACTC GGCAAGTGAA ATATATAAAA ACCTCGATGG CAGCATTACT TCGCAGAAAG GACGTGAGCT GTTTAATCAG CTTATCGACA TTAGAAAACA ATATAGTGTG AGCATTAACA AAGCCATTGA CTATGCGATG GATGAGCAAG ATGCGTTGGC TACCGAATTG GTGTTTGGCG ATATAGCTGC TATCCAATCG CTTTATTTTA CCAAGCTCAA TGAGTTGACT GCATTACAGG TCTCATTCGT TGATCATGCT AAGCAGGTGA CAAAAGAATA TATCCACGAT GCGCTGTTAT GGATGTTAAT ACTATCCGTT TTCTCTACGG TATTAGGATG CCTTACGGCC TGGCTATTGA CCCGTAGTGT CACGACACCG TTATCTATTG CACTTTCTTC TGCGAAGCGC ATCAGCGAAG GTGATCTGAG TGGTTCGATT GTCGTCAATA ACCGTGATGA AACGGGGTTG CTATTGGAGG CTATGCAGGA AATGCAAGCG GCGCTAACAC GGATGGTGGT TGGCGTCAGA AACAATGCCG AGAGTGTCGC GACGGCCAGC ATGCAGATTG CTCAGGGTAA TGCTGATTTA TCATCACGAA CTGAAGAGCA GGCGAGTGCG CTGGAAGAAA CCTCCTCGAC CATGACGCAA TTAGGGATGA CGGTAAAAAA CAATGCTGAT AACGCGCTTC AGGCGAACGT GTTGGCGAAA AACGCAAGCA CTGTTGCGCA GCAGGGAGGC GATGTTGTCA ATGAGGTGGT GGACACGATG AGAGCGATCA ATGAAAGCTC GCGTAGCATT GCGGATATCA TCAATGTCAT CGACAGCATT GCCTTTCAGA CGAATATTCT GGCACTTAAC GCTGCTGTTG AGGCGGCACG TGCTGGTGAA CAAGGTCGTG GTTTTGCTGT TGTGGCTGGA GAAGTGCGTA ACTTGGCACA GCGCAGTGCC GAAGCGGCTA AAGAAATTAA GAATCTGATT ACGGCCAGCG TTGAACGCGT TGAGCTTGGC TCTGTGTTGG TTAACAAAGC GGGGGACACG ATGCAGCAGG TCGTGATGTC TATTCGTCAG TTGAGCGATA CGGTATCCGA GATCAGCGCG GCAAGTGCTG AACAGTCGAC GGGGGTTGAA CAGGTGGGGA TCGCTGTCAG CCAAATGGAT CAGACCACAC AGCAGAATGC TGCTTTGGTA GAAGAATCCG CTGCTGCCGC ACAAAGTCTC AAGGAGCAAG CCGATCAGCT TGTTAGAGAA GTTTCCGTGT TTAGAATTGC GGGCCATAAA CCCTCAATGT TGCAACCTGC AACTCAGGCT CTCTCGCTTG TGGCGATGCT CCCGGTCTCT ACTCGTGCAG CCGCTCAACG TCCGTCAGAT TGGACGAATT TTTAA
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Protein sequence | MDFFKNIKIG NRLALGFGLL IILTLVLSSV GYYFMKDIGT EVDEITEDRM VKVDMLRDIQ DILNTNVRTL RDIILLPADR NQEKQALRAV IVKTTNSASE IYKNLDGSIT SQKGRELFNQ LIDIRKQYSV SINKAIDYAM DEQDALATEL VFGDIAAIQS LYFTKLNELT ALQVSFVDHA KQVTKEYIHD ALLWMLILSV FSTVLGCLTA WLLTRSVTTP LSIALSSAKR ISEGDLSGSI VVNNRDETGL LLEAMQEMQA ALTRMVVGVR NNAESVATAS MQIAQGNADL SSRTEEQASA LEETSSTMTQ LGMTVKNNAD NALQANVLAK NASTVAQQGG DVVNEVVDTM RAINESSRSI ADIINVIDSI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRNLAQRSA EAAKEIKNLI TASVERVELG SVLVNKAGDT MQQVVMSIRQ LSDTVSEISA ASAEQSTGVE QVGIAVSQMD QTTQQNAALV EESAAAAQSL KEQADQLVRE VSVFRIAGHK PSMLQPATQA LSLVAMLPVS TRAAAQRPSD WTNF
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