More than 300 homologs were found in PanDaTox collection
for query gene Rfer_3119 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  100 
 
 
554 aa  1091    Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_008752  Aave_4294  methyl-accepting chemotaxis sensory transducer  53.13 
 
 
539 aa  487  1e-136  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  56.35 
 
 
584 aa  402  1e-111  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  45.6 
 
 
583 aa  399  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  59.29 
 
 
554 aa  382  1e-104  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  43.22 
 
 
552 aa  361  2e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  45.84 
 
 
559 aa  360  4e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  43.35 
 
 
542 aa  360  4e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  62.39 
 
 
594 aa  358  9.999999999999999e-98  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
553 aa  357  3.9999999999999996e-97  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  60.19 
 
 
589 aa  355  1e-96  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
559 aa  352  1e-95  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  57.63 
 
 
550 aa  350  4e-95  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  57.91 
 
 
550 aa  350  4e-95  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
569 aa  350  5e-95  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  47.46 
 
 
586 aa  349  8e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  43.93 
 
 
520 aa  345  1e-93  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
554 aa  345  2e-93  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  59.69 
 
 
561 aa  343  5e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
589 aa  340  4e-92  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  58.64 
 
 
602 aa  340  4e-92  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
572 aa  337  1.9999999999999998e-91  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  51.95 
 
 
513 aa  338  1.9999999999999998e-91  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
508 aa  337  2.9999999999999997e-91  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  50.35 
 
 
591 aa  337  2.9999999999999997e-91  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  55.52 
 
 
661 aa  337  2.9999999999999997e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
578 aa  336  7.999999999999999e-91  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
527 aa  336  7.999999999999999e-91  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
596 aa  335  1e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  44.32 
 
 
595 aa  335  2e-90  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  60.13 
 
 
591 aa  334  3e-90  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
537 aa  333  5e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  57.8 
 
 
674 aa  332  8e-90  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  43.46 
 
 
580 aa  332  1e-89  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
523 aa  331  2e-89  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  57.8 
 
 
674 aa  331  2e-89  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  52.57 
 
 
581 aa  328  2.0000000000000001e-88  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  46.04 
 
 
577 aa  328  2.0000000000000001e-88  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  59.54 
 
 
622 aa  328  2.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  63.6 
 
 
536 aa  328  2.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  52.31 
 
 
579 aa  327  3e-88  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  43.55 
 
 
511 aa  325  1e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  42.97 
 
 
520 aa  325  1e-87  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  59.12 
 
 
585 aa  323  3e-87  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  52.82 
 
 
668 aa  323  4e-87  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  46.82 
 
 
589 aa  322  9.000000000000001e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  47.4 
 
 
651 aa  321  1.9999999999999998e-86  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
532 aa  321  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  41.71 
 
 
587 aa  321  1.9999999999999998e-86  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
585 aa  322  1.9999999999999998e-86  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  49.62 
 
 
573 aa  320  5e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  42.25 
 
 
520 aa  320  5e-86  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  52.73 
 
 
592 aa  320  6e-86  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  58.84 
 
 
586 aa  319  7e-86  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  51.7 
 
 
628 aa  319  9e-86  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  45.42 
 
 
516 aa  318  1e-85  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  55.28 
 
 
667 aa  318  1e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  61.21 
 
 
589 aa  318  2e-85  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
642 aa  318  2e-85  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  59.53 
 
 
578 aa  317  2e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  55.56 
 
 
394 aa  318  2e-85  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  55.84 
 
 
649 aa  317  3e-85  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  55.84 
 
 
649 aa  317  3e-85  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  54.26 
 
 
653 aa  317  3e-85  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  55.12 
 
 
579 aa  317  5e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  54.11 
 
 
653 aa  317  5e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  41.68 
 
 
547 aa  317  5e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  50.66 
 
 
543 aa  316  6e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
584 aa  316  6e-85  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  56.56 
 
 
573 aa  316  7e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  57.83 
 
 
579 aa  315  9.999999999999999e-85  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  54.68 
 
 
557 aa  315  9.999999999999999e-85  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  54.68 
 
 
557 aa  315  9.999999999999999e-85  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  57.98 
 
 
598 aa  315  9.999999999999999e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  43.07 
 
 
608 aa  315  1.9999999999999998e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  51.63 
 
 
513 aa  314  1.9999999999999998e-84  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  58.23 
 
 
618 aa  314  1.9999999999999998e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  54.68 
 
 
557 aa  315  1.9999999999999998e-84  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  58.69 
 
 
615 aa  314  2.9999999999999996e-84  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  57.63 
 
 
733 aa  314  2.9999999999999996e-84  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  54.21 
 
 
653 aa  314  2.9999999999999996e-84  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  58.69 
 
 
615 aa  314  2.9999999999999996e-84  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  53.58 
 
 
579 aa  313  3.9999999999999997e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
558 aa  313  3.9999999999999997e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  55.97 
 
 
598 aa  313  6.999999999999999e-84  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  58.28 
 
 
567 aa  313  6.999999999999999e-84  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
559 aa  313  6.999999999999999e-84  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  54.91 
 
 
575 aa  312  7.999999999999999e-84  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  43.93 
 
 
594 aa  312  9e-84  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
525 aa  312  9e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  60.48 
 
 
556 aa  311  1e-83  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  49.49 
 
 
635 aa  311  1e-83  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  57.91 
 
 
617 aa  312  1e-83  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
557 aa  312  1e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  53.07 
 
 
652 aa  312  1e-83  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
618 aa  312  1e-83  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  55.32 
 
 
585 aa  311  2e-83  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
471 aa  311  2e-83  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  57.65 
 
 
548 aa  311  2e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0071  methyl-accepting chemotaxis sensory transducer  55.21 
 
 
630 aa  311  2e-83  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>