More than 300 homologs were found in PanDaTox collection
for query gene Rpic12D_1771 on replicon NC_012856
Organism: Ralstonia pickettii 12D



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  67.25 
 
 
545 aa  635    Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  100 
 
 
520 aa  1033    Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  72.51 
 
 
585 aa  714    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  66.28 
 
 
539 aa  642    Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  70.18 
 
 
587 aa  691    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  63.74 
 
 
565 aa  636    Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  98.85 
 
 
520 aa  1021    Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  65.51 
 
 
539 aa  621  1e-176  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  65.51 
 
 
539 aa  619  1e-176  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  65.51 
 
 
539 aa  619  1e-176  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  60.65 
 
 
541 aa  581  1e-164  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  61.22 
 
 
583 aa  579  1e-164  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_010086  Bmul_4184  methyl-accepting chemotaxis sensory transducer  67.48 
 
 
493 aa  560  1e-158  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_2002  methyl-accepting chemotaxis protein  60.45 
 
 
580 aa  531  1e-150  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0232  methyl-accepting chemotaxis protein  60.45 
 
 
580 aa  531  1e-150  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1130  methyl-accepting chemotaxis protein  60.45 
 
 
580 aa  531  1e-150  Burkholderia mallei ATCC 23344  Bacteria  normal  0.306094  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1571  methyl-accepting chemotaxis protein  60.45 
 
 
580 aa  531  1e-150  Burkholderia mallei SAVP1  Bacteria  normal  0.295886  n/a   
 
 
-
 
NC_009080  BMA10247_0927  methyl-accepting chemotaxis protein  60.45 
 
 
580 aa  531  1e-150  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2139  methyl-accepting chemotaxis protein  60.26 
 
 
616 aa  530  1e-149  Burkholderia pseudomallei 1710b  Bacteria  normal  0.942679  n/a   
 
 
-
 
NC_007651  BTH_I2374  methyl-accepting chemotaxis protein  60.49 
 
 
586 aa  530  1e-149  Burkholderia thailandensis E264  Bacteria  normal  0.205822  n/a   
 
 
-
 
NC_009074  BURPS668_1983  methyl-accepting chemotaxis protein  60.45 
 
 
580 aa  523  1e-147  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6305  methyl-accepting chemotaxis sensory transducer  53.63 
 
 
528 aa  486  1e-136  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6464  methyl-accepting chemotaxis sensory transducer  53.63 
 
 
528 aa  485  1e-136  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6699  methyl-accepting chemotaxis sensory transducer  53.63 
 
 
528 aa  485  1e-136  Burkholderia cenocepacia HI2424  Bacteria  normal  0.971949  normal  0.6752 
 
 
-
 
NC_003295  RSc1950  methyl-accepting chemotaxis transducer transmembrane protein  79.62 
 
 
329 aa  479  1e-134  Ralstonia solanacearum GMI1000  Bacteria  normal  0.265012  normal  0.886741 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  51.85 
 
 
520 aa  469  1.0000000000000001e-131  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  52.32 
 
 
618 aa  468  9.999999999999999e-131  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  53.09 
 
 
525 aa  464  1e-129  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  52.11 
 
 
581 aa  457  1e-127  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1894  methyl-accepting chemotaxis transducer transmembrane protein  52.22 
 
 
535 aa  454  1.0000000000000001e-126  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0710104  normal  0.94486 
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  49.33 
 
 
556 aa  439  9.999999999999999e-123  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  47.29 
 
 
547 aa  440  9.999999999999999e-123  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  48.27 
 
 
539 aa  429  1e-119  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_008826  Mpe_B0133  methyl-accepting chemotaxis protein  49.61 
 
 
526 aa  395  1e-108  Methylibium petroleiphilum PM1  Bacteria  normal  0.845076  hitchhiker  0.000223015 
 
 
-
 
NC_007650  BTH_II1955  methyl-accepting chemotaxis protein  74.35 
 
 
685 aa  384  1e-105  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  60.66 
 
 
559 aa  381  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007435  BURPS1710b_A2013  methyl-accepting chemotaxis protein  73.77 
 
 
634 aa  379  1e-103  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0627  methyl-accepting chemotaxis protein  73.77 
 
 
616 aa  378  1e-103  Burkholderia pseudomallei 1106a  Bacteria  normal  0.202062  n/a   
 
 
-
 
NC_009075  BURPS668_A0719  methyl-accepting chemotaxis protein  73.77 
 
 
616 aa  378  1e-103  Burkholderia pseudomallei 668  Bacteria  normal  0.152122  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
537 aa  375  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  47.38 
 
 
586 aa  367  1e-100  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
511 aa  367  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  44.09 
 
 
578 aa  368  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  60.9 
 
 
572 aa  365  1e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  65.69 
 
 
575 aa  363  4e-99  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  44.11 
 
 
580 aa  363  5.0000000000000005e-99  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  46.48 
 
 
559 aa  362  1e-98  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  44.51 
 
 
583 aa  359  7e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  47.16 
 
 
622 aa  357  1.9999999999999998e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  64.38 
 
 
598 aa  353  5e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  52.44 
 
 
513 aa  348  1e-94  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  45.47 
 
 
586 aa  347  2e-94  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  53.17 
 
 
650 aa  347  3e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
542 aa  347  4e-94  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  61.93 
 
 
569 aa  347  4e-94  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  54.26 
 
 
566 aa  345  8.999999999999999e-94  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  45.47 
 
 
588 aa  344  2.9999999999999997e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  56.03 
 
 
522 aa  344  2.9999999999999997e-93  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  56.03 
 
 
522 aa  344  2.9999999999999997e-93  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
592 aa  344  2.9999999999999997e-93  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  45.77 
 
 
601 aa  343  5e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  46.14 
 
 
615 aa  342  9e-93  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  42.43 
 
 
552 aa  342  9e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  46.14 
 
 
615 aa  342  9e-93  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  60.42 
 
 
513 aa  341  2e-92  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  63.18 
 
 
585 aa  340  2.9999999999999998e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  43.95 
 
 
553 aa  340  4e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
561 aa  340  5e-92  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  51.23 
 
 
567 aa  340  5e-92  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  42 
 
 
554 aa  339  8e-92  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  43.81 
 
 
584 aa  339  9e-92  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  52.03 
 
 
653 aa  337  1.9999999999999998e-91  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  52.03 
 
 
653 aa  337  1.9999999999999998e-91  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  48.9 
 
 
554 aa  337  1.9999999999999998e-91  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  43.81 
 
 
570 aa  337  2.9999999999999997e-91  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  46.82 
 
 
580 aa  337  2.9999999999999997e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  43.27 
 
 
559 aa  336  7e-91  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  60.42 
 
 
627 aa  335  1e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  61.36 
 
 
433 aa  335  1e-90  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  43.16 
 
 
555 aa  334  2e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  48.41 
 
 
554 aa  335  2e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
585 aa  335  2e-90  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  56.88 
 
 
549 aa  333  4e-90  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  59.19 
 
 
617 aa  333  4e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  57.36 
 
 
535 aa  333  4e-90  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  56.32 
 
 
600 aa  332  8e-90  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  66.43 
 
 
512 aa  332  8e-90  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  53.91 
 
 
618 aa  332  1e-89  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  61.08 
 
 
595 aa  331  2e-89  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  66.31 
 
 
546 aa  330  3e-89  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  66.31 
 
 
546 aa  330  3e-89  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  66.31 
 
 
546 aa  330  3e-89  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  65.69 
 
 
577 aa  330  3e-89  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  66.31 
 
 
546 aa  330  3e-89  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  66.31 
 
 
546 aa  330  3e-89  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  41.67 
 
 
543 aa  330  4e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  66.31 
 
 
511 aa  330  4e-89  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  66.31 
 
 
526 aa  330  4e-89  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1029  methyl-accepting chemotaxis protein  43.4 
 
 
562 aa  330  4e-89  Burkholderia pseudomallei 1710b  Bacteria  normal  0.815966  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.51 
 
 
584 aa  330  5.0000000000000004e-89  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>