| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2831 |
|---|
| Symbol | |
|---|
| ID | 8531235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3098144 |
|---|
| End bp | 3099808 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003260191 |
|---|
| Protein GI | 261822085 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTGT CCAACTGGCG TATAGGATAT CGATTAGGAG CAGGGTTTTC TTTTCTGGTA
TTAATGCTTC TGATAATTGG CAGCGTTGCA ATTTCAAAGC TAAGTGATTT TCATCAGAAA
ATGGATGATA TCGTTTCTCA AAACTACCCA TTAACCGTCA AGAGCAATAC ACTCATTGAT
GAGCTAAATG GTTACCTCAA CAATCAGCAA CTGTTGTTAT TACTTAAATC AGAAAGTGAA
ATCAATAAAC AGTTTGCGTT GAACAAAGAG CGTTCAGGAA AGATATCTGA ACTCATGGAA
TATTTAAATC AATCCGTTAA TGACGATAAA TCTGTTACGG TACTGCGCGA TATCGGCGAC
ATCCGACGCG ATTTTCTTGG TTCAGCGAAT AAGCTTTCTT CACTGGTCTC TGCTGGGAAT
ACGGATGCGG CTGCTGAAGA ATATTTCAAT GTAACACGTG TTACTCAAGA GAAATACACC
AGCAAAGTAA AGGAATTCAT CGATATACAG GATGATAAGA TGTCATCCTC AGCGCAAGAA
GTGAGTGACA GCTATAAAAA TGCGCTGATG GTGCTTGCCA CGATCATTTT AATTAGTGCG
TTGGCTGGGT TGATTATTGC TTCATTGATT ACCCGTAGCG TAACCCAACC GCTACAAGAA
GCTCTCGTTA TTGCCGAAAA TGTCGCGAAA GGCGATCTGA CCTCTGAAAT TTATACCGAT
CGCAAAGATG AAACAGGTCA GTTGCTATCC GCCTTGAATA ATATGAACGG TAGTCTGAGG
CAGATCGTCA GTCAGGTGCG TGATGGTGCT GAAACGATCT CCAGTGCGGC ATCGCAAATT
GCCGCGGGAA ATCAGGATTT ATCTGCCAGA ACGGAAGAGC AGGCAAGTTC GCTGGAAGAA
ACAGCCTCAT CGATGGAACA ATTAACGTCA ACGATAAGAA ATACCGCAGA TAATACGACG
CAGGCGACAG ATCTTGCGGC TGGCGCTTCT GCAACGGTGA AGAAAAGTGG CGCGATGATG
GAAACGGTAA CGCAGGAGAT GCGCGGCATT CGTGATTCGT CGCAGCGTAT GGCGGAAATT
ATCGGTGTGA TTGATGGCAT TGCCTTCCAA ACCAACATTT TGGCACTGAA TGCGGCCGTT
GAAGCGGCGC GTGCGGGTGA GCAGGGTCGA GGGTTTGCCG TTGTCGCCAC TGAGGTACGT
GCACTGGCTC AACGAAGTGC TACGGCGGCA AAAGAAATTA AAGAACTTAT CGATGATTCG
TTTAAGAAAG TGCAGGATGG TATGGGACTG GTGGAAGAAA CCGGCATCAC GATGAATTCA
CTGGTGGCGA ACGTGCAGGG CGTAACAGGA ATTATCAGTG AAATTGCGCA GGCCAGTCGT
GAGCAAAGTG ATGGTATCAA TCAAATTAAT TTGGCCGTTG GGCAGATTGA TACCACAACC
CAGCAAAATG CGGCGTTGGT TGAAGAGTCT GCGGCTGCGG CTCTCTCTTT GCAGGATCAG
GCAAATAGCC TCGCACGTAC GGTCAGCGTA TTCAACCTTG GCGCATCTTA TAAAAGTGCT
GCGTTAACGA GAAAAATAGA AACGCCTGCC CTGGCTGCAC CTAAAAATAA TCGCGCAGAA
AAAACGCCTG CTAAAGGCGA TTTGGCTGAC TGGACTACGT TCTAA
|
|---|
| Protein sequence | MGLSNWRIGY RLGAGFSFLV LMLLIIGSVA ISKLSDFHQK MDDIVSQNYP LTVKSNTLID
ELNGYLNNQQ LLLLLKSESE INKQFALNKE RSGKISELME YLNQSVNDDK SVTVLRDIGD
IRRDFLGSAN KLSSLVSAGN TDAAAEEYFN VTRVTQEKYT SKVKEFIDIQ DDKMSSSAQE
VSDSYKNALM VLATIILISA LAGLIIASLI TRSVTQPLQE ALVIAENVAK GDLTSEIYTD
RKDETGQLLS ALNNMNGSLR QIVSQVRDGA ETISSAASQI AAGNQDLSAR TEEQASSLEE
TASSMEQLTS TIRNTADNTT QATDLAAGAS ATVKKSGAMM ETVTQEMRGI RDSSQRMAEI
IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVATEVR ALAQRSATAA KEIKELIDDS
FKKVQDGMGL VEETGITMNS LVANVQGVTG IISEIAQASR EQSDGINQIN LAVGQIDTTT
QQNAALVEES AAAALSLQDQ ANSLARTVSV FNLGASYKSA ALTRKIETPA LAAPKNNRAE
KTPAKGDLAD WTTF
|
|---|
| |