More than 300 homologs were found in PanDaTox collection
for query gene PC1_4071 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  80.74 
 
 
540 aa  825    Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  63.84 
 
 
561 aa  687    Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  93.33 
 
 
555 aa  1012    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  64.35 
 
 
559 aa  675    Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
552 aa  699    Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  100 
 
 
553 aa  1098    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  82.41 
 
 
540 aa  851    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  60.18 
 
 
554 aa  599  1e-170  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  59.07 
 
 
554 aa  595  1e-169  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  54.46 
 
 
554 aa  568  1e-161  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1602  methyl-accepting chemotaxis sensory transducer  53.87 
 
 
554 aa  546  1e-154  Dickeya zeae Ech1591  Bacteria  normal  0.33331  n/a   
 
 
-
 
NC_011083  SeHA_C3510  methyl-accepting chemotaxis protein II  46.98 
 
 
521 aa  426  1e-118  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.000000000027417 
 
 
-
 
NC_011149  SeAg_B3402  methyl-accepting chemotaxis protein II  46.69 
 
 
522 aa  424  1e-117  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3572  methyl-accepting chemotaxis protein II  46.69 
 
 
522 aa  424  1e-117  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.258237 
 
 
-
 
NC_011080  SNSL254_A3476  methyl-accepting chemotaxis protein II  46.98 
 
 
521 aa  424  1e-117  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.692076  normal 
 
 
-
 
NC_011094  SeSA_A3406  methyl-accepting chemotaxis protein II  46.69 
 
 
522 aa  424  1e-117  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.779837  normal 
 
 
-
 
NC_009436  Ent638_3526  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
519 aa  409  1e-113  Enterobacter sp. 638  Bacteria  normal  0.398255  normal  0.520422 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  45.6 
 
 
595 aa  385  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_009436  Ent638_2119  methyl-accepting chemotaxis sensory transducer  40.42 
 
 
549 aa  379  1e-104  Enterobacter sp. 638  Bacteria  normal  normal  0.164628 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
569 aa  377  1e-103  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  43.4 
 
 
543 aa  373  1e-102  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
559 aa  374  1e-102  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
551 aa  371  1e-101  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
583 aa  367  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
553 aa  363  3e-99  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
551 aa  361  2e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  45.07 
 
 
586 aa  360  5e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
511 aa  359  7e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  42.88 
 
 
537 aa  359  8e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
592 aa  358  9.999999999999999e-98  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
575 aa  355  1e-96  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  39.32 
 
 
556 aa  355  1e-96  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
578 aa  354  2e-96  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  41.68 
 
 
554 aa  354  2e-96  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
548 aa  353  4e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
559 aa  352  1e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
586 aa  350  6e-95  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  42.47 
 
 
565 aa  348  2e-94  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  42.33 
 
 
584 aa  348  2e-94  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  44.75 
 
 
581 aa  348  2e-94  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
577 aa  347  5e-94  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
556 aa  345  1e-93  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
579 aa  345  1e-93  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
620 aa  344  2e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  53.26 
 
 
562 aa  344  2.9999999999999997e-93  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  42.1 
 
 
580 aa  344  2.9999999999999997e-93  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  61.03 
 
 
650 aa  342  1e-92  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  40.1 
 
 
598 aa  340  2.9999999999999998e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  52.57 
 
 
566 aa  340  2.9999999999999998e-92  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  42.72 
 
 
513 aa  340  4e-92  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  52.34 
 
 
572 aa  340  5e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
549 aa  339  8e-92  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
516 aa  338  9.999999999999999e-92  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
556 aa  338  9.999999999999999e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  56.18 
 
 
557 aa  337  1.9999999999999998e-91  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
520 aa  338  1.9999999999999998e-91  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  56.18 
 
 
557 aa  337  1.9999999999999998e-91  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  38.63 
 
 
556 aa  337  2.9999999999999997e-91  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  40.25 
 
 
548 aa  337  2.9999999999999997e-91  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  42.35 
 
 
585 aa  337  5e-91  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  55.88 
 
 
557 aa  336  7e-91  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  39.2 
 
 
552 aa  335  9e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
596 aa  333  7.000000000000001e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  49.74 
 
 
542 aa  332  1e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  39.74 
 
 
589 aa  332  2e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  42.14 
 
 
587 aa  331  2e-89  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3864  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
543 aa  330  3e-89  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  48.1 
 
 
651 aa  330  3e-89  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
584 aa  330  3e-89  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
520 aa  330  4e-89  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  50.27 
 
 
661 aa  330  6e-89  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  57.73 
 
 
653 aa  329  7e-89  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  57.73 
 
 
653 aa  329  8e-89  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  47 
 
 
539 aa  329  8e-89  Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  43.18 
 
 
513 aa  329  1.0000000000000001e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
589 aa  328  1.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
520 aa  329  1.0000000000000001e-88  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_007974  Rmet_5250  methyl-accepting chemotaxis protein, sensory transducer  44.12 
 
 
677 aa  328  2.0000000000000001e-88  Cupriavidus metallidurans CH34  Bacteria  normal  0.0837898  normal  0.0130353 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  40.26 
 
 
557 aa  328  2.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  50.4 
 
 
527 aa  328  2.0000000000000001e-88  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
545 aa  327  3e-88  Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
622 aa  327  4.0000000000000003e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  51.05 
 
 
579 aa  326  6e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
535 aa  326  6e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  39.9 
 
 
555 aa  326  6e-88  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  39.75 
 
 
589 aa  325  1e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  40.14 
 
 
570 aa  325  1e-87  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
532 aa  325  2e-87  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  55.98 
 
 
537 aa  324  2e-87  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
605 aa  324  3e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
580 aa  323  4e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0227  methyl-accepting chemotaxis sensory transducer  43.18 
 
 
592 aa  323  6e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
532 aa  322  9.000000000000001e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  43.91 
 
 
653 aa  322  9.000000000000001e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0110  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
548 aa  322  9.999999999999999e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.975087  n/a   
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  40.93 
 
 
605 aa  322  9.999999999999999e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  41.78 
 
 
539 aa  322  1.9999999999999998e-86  Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_010002  Daci_0740  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
565 aa  321  1.9999999999999998e-86  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
525 aa  321  1.9999999999999998e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
615 aa  320  3e-86  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
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