More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5250 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5250  methyl-accepting chemotaxis protein, sensory transducer  100 
 
 
677 aa  1331    Cupriavidus metallidurans CH34  Bacteria  normal  0.0837898  normal  0.0130353 
 
 
-
 
NC_007347  Reut_A1685  histidine kinase, HAMP region: chemotaxis sensory transducer  47.66 
 
 
524 aa  386  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  0.280518  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  46.09 
 
 
572 aa  384  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  44.25 
 
 
578 aa  376  1e-103  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  46.12 
 
 
580 aa  373  1e-102  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  45.19 
 
 
592 aa  365  2e-99  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  44.21 
 
 
537 aa  358  9.999999999999999e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  44.4 
 
 
543 aa  358  1.9999999999999998e-97  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  43.41 
 
 
511 aa  358  1.9999999999999998e-97  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
553 aa  354  2e-96  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
583 aa  355  2e-96  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
559 aa  354  2.9999999999999997e-96  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
559 aa  353  5.9999999999999994e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  45.32 
 
 
573 aa  347  4e-94  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
569 aa  346  6e-94  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
549 aa  346  8e-94  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
555 aa  346  8e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
557 aa  345  1e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  40.66 
 
 
596 aa  343  5e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  51.33 
 
 
566 aa  342  1e-92  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
550 aa  340  7e-92  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
595 aa  339  8e-92  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  44.82 
 
 
575 aa  339  9.999999999999999e-92  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  41.78 
 
 
552 aa  339  9.999999999999999e-92  Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
577 aa  338  1.9999999999999998e-91  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  45.74 
 
 
586 aa  337  2.9999999999999997e-91  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
542 aa  336  9e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
550 aa  335  1e-90  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  45.42 
 
 
513 aa  334  2e-90  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  54.68 
 
 
562 aa  334  3e-90  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  59.7 
 
 
617 aa  334  3e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
587 aa  334  4e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  60 
 
 
618 aa  333  6e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  41.95 
 
 
551 aa  332  1e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
554 aa  332  2e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  44.21 
 
 
585 aa  331  2e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
561 aa  332  2e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  41.39 
 
 
584 aa  330  4e-89  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  50.35 
 
 
553 aa  330  4e-89  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  50.35 
 
 
553 aa  330  4e-89  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  41.73 
 
 
553 aa  329  8e-89  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  58.77 
 
 
598 aa  328  2.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
585 aa  327  4.0000000000000003e-88  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_013421  Pecwa_2019  methyl-accepting chemotaxis sensory transducer  50 
 
 
644 aa  326  7e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  0.858801  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
589 aa  326  7e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
584 aa  326  8.000000000000001e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  49.36 
 
 
539 aa  326  1e-87  Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
588 aa  326  1e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  44.25 
 
 
589 aa  326  1e-87  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  42.97 
 
 
513 aa  326  1e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  62.13 
 
 
752 aa  325  1e-87  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  56.63 
 
 
601 aa  325  1e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
567 aa  325  1e-87  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  43.5 
 
 
581 aa  325  2e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
540 aa  325  2e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
580 aa  325  2e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  39.2 
 
 
559 aa  323  5e-87  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  41.7 
 
 
552 aa  323  5e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  59.06 
 
 
648 aa  323  5e-87  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  64.46 
 
 
706 aa  323  5e-87  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_008061  Bcen_4591  methyl-accepting chemotaxis sensory transducer  43.13 
 
 
565 aa  323  6e-87  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.521693  n/a   
 
 
-
 
NC_008543  Bcen2424_3772  methyl-accepting chemotaxis sensory transducer  43.13 
 
 
565 aa  323  6e-87  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.430546 
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  56.32 
 
 
539 aa  323  7e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  54.29 
 
 
527 aa  323  7e-87  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  53.46 
 
 
653 aa  323  7e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
554 aa  323  8e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  59.73 
 
 
655 aa  323  8e-87  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_010515  Bcenmc03_3751  methyl-accepting chemotaxis sensory transducer  43.13 
 
 
564 aa  323  8e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.208452  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  53.46 
 
 
653 aa  323  9.000000000000001e-87  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  59.4 
 
 
648 aa  322  9.999999999999999e-87  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  56.09 
 
 
539 aa  322  9.999999999999999e-87  Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  56.23 
 
 
628 aa  322  9.999999999999999e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
565 aa  322  9.999999999999999e-87  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  48.62 
 
 
556 aa  322  9.999999999999999e-87  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  59.19 
 
 
733 aa  322  9.999999999999999e-87  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  57.77 
 
 
537 aa  322  9.999999999999999e-87  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  65.94 
 
 
705 aa  322  1.9999999999999998e-86  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  50.35 
 
 
553 aa  322  1.9999999999999998e-86  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  56.32 
 
 
539 aa  322  1.9999999999999998e-86  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  56.32 
 
 
539 aa  322  1.9999999999999998e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
554 aa  322  1.9999999999999998e-86  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
540 aa  321  3e-86  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  61.26 
 
 
615 aa  321  3e-86  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  61.26 
 
 
615 aa  321  3e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0129  methyl-accepting chemotaxis sensory transducer  41.15 
 
 
511 aa  320  3.9999999999999996e-86  Burkholderia xenovorans LB400  Bacteria  normal  0.469561  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
532 aa  320  3.9999999999999996e-86  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  50.53 
 
 
553 aa  320  5e-86  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_007348  Reut_B3808  histidine kinase, HAMP region: chemotaxis sensory transducer  41.56 
 
 
569 aa  320  5e-86  Ralstonia eutropha JMP134  Bacteria  normal  0.880796  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.62 
 
 
598 aa  320  6e-86  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
535 aa  320  7e-86  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  43.22 
 
 
586 aa  320  7e-86  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  57.52 
 
 
605 aa  319  9e-86  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  50.47 
 
 
551 aa  318  1e-85  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  56.22 
 
 
608 aa  319  1e-85  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  48.39 
 
 
584 aa  319  1e-85  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_012892  B21_04198  hypothetical protein  50.47 
 
 
551 aa  318  1e-85  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  56.22 
 
 
608 aa  319  1e-85  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  50 
 
 
552 aa  319  1e-85  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  45.71 
 
 
579 aa  319  1e-85  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  51.21 
 
 
557 aa  318  2e-85  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
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