Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS04782 |
Symbol | RSp1363 |
ID | 1223675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1712726 |
End bp | 1714357 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637241226 |
Product | methyl-accepting chemotaxis transducer transmembrane protein |
Protein accession | NP_522922 |
Protein GI | 17549582 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCT CGGATATGAG GATCGGGGTA CGGCTCGGTG CAGCGTTCGC GCTTGTCGTG GCGTTGCTGA TCGGGATCGC CGCGGTCGGC ATACAACGGC TGGACGACAA CAACACGAAG ATGGGCCAGA TCGTGAGCGA GCGCTACTCA CTGATCGCGC TGAGCAACCA GATCAAGAAC AACGGCTACA AGGCCAACGG CATTCTCAGC AATCTGCTGC TCGTCACCAC GCCCGAGCAG AAGACGAAGT ACATGAGTGA CTACGCGGCC ATCCGCCAGG CCAACGCGCA GGCATATGGC CGCCTGGAGA AGCTGCTCAC GACCGATCAG GGCAAGGCGC TCTTCAAAGA ACAGTTCGAT GCGCGTTCAG CCTACGGTGC CAGCGTCCGC AAGTTCTTCG CGCTGGTCGA TGCCGACAAC GTGCAGGAGG CGCGTGCCCT GTACCAGGGT GACATGTCGC GCCTGCAAGA CCGGTACTAC GTGCTGGTCG ACAAGATGGT CGACCACCAG GCCGGCGAGA TGGAGCACGA TGTGAGCGAG GCTGCCGCCC AGGGCGCCAA CGCCAAGATC CAGATGATCG TGCTGGCCGT TCTTGCCACG CTGCTGGCCA TTGCCACGGG GGCCTTCATC ACCCGCACCA TCACGCGCCC GATTAACCAT GCCATGCACC TGGCTGAGGC CGTGGCGCAG GGCAATCTGA CGCATCTGCT GGAGGTCGAC ACGCAAGACG AGATCGGCCG TCTGCTGGCG GCGCTCAAGC ACATGATCGA AAACCTGCAC GGCATTGTCA GCCAGGTGCG GGGCGGCACG GACACCATCA CCCGCGCATC GAGCGAAGTG GCCAGCGGCA ACATCGATCT CTCGAGCCGT ACCGAACAGC AGGCCAGCTC ACTGGAGGAA ACAGCGGCGG CCATGGAGCA GCTCACCTCC ACCGTCAAGC AGAACGCCGA CAACGCGCAG GAGGCCAGCC GCCTGGCATC CAATGCGTCG ATGGTCGCCA CCAAGGGCGG CGATGCCGTG GACGAGGCGA TCCAGACCAT GAGCACGATC AACACGTCGT CGCGCAAGAT CGTCGACATC ATCGGCGTGA TCGACGGCAT TGCCTTCCAG ACCAATATCC TGGCGCTCAA CGCTGCGGTG GAAGCCGCGC GCGCCGGCGA GCAGGGTCGC GGCTTTGCCG TGGTGGCTGG CGAGGTGCGC AGCCTCGCGC AGCGCAGCGC AGCAGCGGCC AAGGAGATCA AGGCACTCAT CGAGGATTCC GTCGGCCACG TCAGCACCGG CACGGCCAAG GTGGAAGAGG CCGGCCAGAT CATCCGCGAC GTGGTGGCCG GCATCCAGAA TGTGACGAAC ATCGTGTCCG AGATCAGCGC ATCGAGCCGC GAGCAGAGCG ACGGCATCGA ACAGATCAAC GAGGCCATCA CGCAGATGGA CAAGGCCACG CAGGAAAACG CCTCGCTGGT GGAGGAAAGC GCCACGGCGG CGCAGGCCCT GCAGGACCAG GCCAATCAAC TGGCCGACAT GGTCAGCACC TTCAAGCTCC ACGCAGACCT GTCTGGCCGT GGCCGCGCCG CGCAAGGCGA GGCAGGCTCT GTGGCACACG TCGCCTGGAG TCAAGCGCAA ACGCTTTCGT AG
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Protein sequence | MRISDMRIGV RLGAAFALVV ALLIGIAAVG IQRLDDNNTK MGQIVSERYS LIALSNQIKN NGYKANGILS NLLLVTTPEQ KTKYMSDYAA IRQANAQAYG RLEKLLTTDQ GKALFKEQFD ARSAYGASVR KFFALVDADN VQEARALYQG DMSRLQDRYY VLVDKMVDHQ AGEMEHDVSE AAAQGANAKI QMIVLAVLAT LLAIATGAFI TRTITRPINH AMHLAEAVAQ GNLTHLLEVD TQDEIGRLLA ALKHMIENLH GIVSQVRGGT DTITRASSEV ASGNIDLSSR TEQQASSLEE TAAAMEQLTS TVKQNADNAQ EASRLASNAS MVATKGGDAV DEAIQTMSTI NTSSRKIVDI IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR SLAQRSAAAA KEIKALIEDS VGHVSTGTAK VEEAGQIIRD VVAGIQNVTN IVSEISASSR EQSDGIEQIN EAITQMDKAT QENASLVEES ATAAQALQDQ ANQLADMVST FKLHADLSGR GRAAQGEAGS VAHVAWSQAQ TLS
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