Gene SeHA_C3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3510 
Symbol 
ID6491531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3403161 
End bp3404726 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content51% 
IMG OID642743638 
Productmethyl-accepting chemotaxis protein II 
Protein accessionYP_002047252 
Protein GI194449206 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.000000000027417 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTTTGC ATAACATTAA AATACGTTCA AAATTATTTA TGGCCTTTGG CTTATTCATT 
GTTCTCATGG TGGTGAGTTC CGCTCTGTCT TTGTTTAGCC TTGATCGGGC TAATACGGGT
ATGCAGAACA TTATTACCAA TGATTATCCC ACCACGGTGA AAGCCAATCT GTTAATCGAT
AATTTTAATG ATTTCATCAT CGCGCAGCAG CTCATGTTAC TGGATGAAGA GGGGCGCTGG
AGCCAGAGTT CGCAGAAAGA GCTGGATGAA ATAAGCCAGC GTATTACGGC GTTACTGGAT
GAGCTTTCCA GCAATCGTCA CGATGCGGCT TCGCAGAAAA TCATTACCGA GATCCGTGAA
GCGCGCCAGC AATACCTGGA GTCCAGATTC CGTATTTTGC AAGATATTCA AAGCCATAAT
CGTCAGGCGG CCATTCAGGA GATGATGACC AGAACGGTGC AAGTGCAAAA GGTCTATAAG
GACAAAGTTC AGGAACTTAT CGCCGTTCAG GATGCGCAGA TGCACAACGC GGGCGTGCAG
GTCGAAGGAG ATTTTAAAAC TAACCGGACG CTGTTAATTA CCCTGGCGCT GATAAGCATC
GCTGCCGGAT GCGTAATGGG ATGGTATATC GTACGTTCCA TTACCCGACC GCTTGATGAA
GCGGTACGCT TTGCCGAGGC GATTGCCGAT GGCGATCTGA CTCGCCATAT CACCACCGAC
TATAAAGATG AAACAGGCGT ACTACTGCAA GCATTAATGG CGATGAAAAC GCGTCTGCTG
GATATCGTAC AGGAAGTGCA AAACGGTTCG GAGAGTATCT CCACGGCGGC GGCGCAAATT
GTCGCCGGTA ACCAGGATTT GGCCGCGCGT ACGGAAGAAC AGGCCAGCTC GGTTGAAGAA
ACGGCGGCGT CGATGGAACA GATTACCGCC ACGGTTAAAA ACACAGCTGA CCATACCAGT
GAAGCGACCA AACTCTCTGC CGGCGCCGCC AGCGTAGTGA AAAACAATGG GGAGATGATG
AATCAAGTGA CGCAGAAAAT GCGCGTCATT AACGATACGG CAAATCGTAT GTCGGATATC
ATCAATATCA TTGATTCCAT TGCCTTTCAG ACCAATATTC TGGCGCTGAA CGCGGCGGTT
GAAGCGGCGC GTGCGGGCGA ACATGGACGT GGTTTTGCCG TTGTCGCCGG AGAGGTTCGC
CAGTTGGCGC AAAAGAGCGC CTCGTCAGCC AGTGAAATCC GTAATTTGAT TGAAGATTCA
ACCAGTCAGA CTCAGGAAGG GATGCACCTG GTGGAGAAAG CCAGCGCCCT GATTAATGGC
ATGGTGGATA ACGTCGAAGA GATGGATGTG ATATTACGCG AGATTGGGCA GGCCAGCCGT
GAGCAAACTG ACGGTATTTC GCAGATTAAC AGCGCGATTG GCCTGATTGA CGCCGCCACG
CAACAAAACT CCTGCCTTGT GGAAGAGTCT GTTGCCGCCG CGGCGTCGCT GAACGAACAG
GCGTTACATT TAAAAGAGCT GGTTAACGTG TTCCGCGTCC GCGAAGAGGA CACGCAGCCC
GCTTAA
 
Protein sequence
MFLHNIKIRS KLFMAFGLFI VLMVVSSALS LFSLDRANTG MQNIITNDYP TTVKANLLID 
NFNDFIIAQQ LMLLDEEGRW SQSSQKELDE ISQRITALLD ELSSNRHDAA SQKIITEIRE
ARQQYLESRF RILQDIQSHN RQAAIQEMMT RTVQVQKVYK DKVQELIAVQ DAQMHNAGVQ
VEGDFKTNRT LLITLALISI AAGCVMGWYI VRSITRPLDE AVRFAEAIAD GDLTRHITTD
YKDETGVLLQ ALMAMKTRLL DIVQEVQNGS ESISTAAAQI VAGNQDLAAR TEEQASSVEE
TAASMEQITA TVKNTADHTS EATKLSAGAA SVVKNNGEMM NQVTQKMRVI NDTANRMSDI
INIIDSIAFQ TNILALNAAV EAARAGEHGR GFAVVAGEVR QLAQKSASSA SEIRNLIEDS
TSQTQEGMHL VEKASALING MVDNVEEMDV ILREIGQASR EQTDGISQIN SAIGLIDAAT
QQNSCLVEES VAAAASLNEQ ALHLKELVNV FRVREEDTQP A