| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0104 |
|---|
| Symbol | |
|---|
| ID | 4669362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 109823 |
|---|
| End bp | 111691 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639821316 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_968491 |
|---|
| Protein GI | 120608813 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTCC TACGCCGTCT CTCCCTGGGG TCGCGGCTGG CGCTGGGCTT CGGCCTGCTC
CTGCTGCTGC TGGCCATCAT CACCGGATTG GGCATCGCCC GCATGTCCAC GCTCGACCAT
ACGTCGCAGC AGATCACCAC CGAGCTCTAC GCCAAGGCGA ATGCCAGCCA GCGCATGGGC
TACCTGGTGC TGGACATCGC GCGGGCCGCG CGCAACATCA TCATCCTGGA AGACCAAGCG
CAGATGGCGT CCAACAAGAC CGTCATCGAC AAGAACACGG CCGAGTTCGC CACCACGATC
GCCCAGCTGC GCCAGCTCGA GATGGCGCCG GAGATCCGCA GCCTCATCGA CGCCGTGGAC
GCCAAGTCCA AGGAATACCT CGCCTTCACC ACCGACGTGA CGGCGCTCGG ACTCTCCAAC
CAGAACCTCG AAGGGCAGAA GCTGCTCTTC GGCCCGCGCT ACAAGTCGCA AGGCGAACTG
TTGGCGCTGC TGGCCCAGCT CGTGAAGCAG TACGAGGGCG AGATGCGGCA GGCCACCGCC
AGCGCCCACG ACACCTTCGT GCAGTCGGCC ACGGTGCTCG GCGTGGTGGC CCTGGTGGCC
GTTCTGGCGG GCATCGCCGG CGCCGTCATG ATCACCCGCT CGATCACCGT CCCGATGGCC
CGCGCGGTGG ACGTGGCCCA CGCCGTGGCC GAAGGCGACC TCACCCGCAC GGTGGACGAC
AGCGGCCGCG ACGAGGCGGC CCTGCTGCTG CAGTCGCTGC AGACCATGAA CGGCAACCTC
ACCCGCGTGG TGCACCAGAT CCGCCAGGCG AGCGACTCCA TCGCCACCGG CTCCTCGCAG
ATCGCCAGCG GCAACGCCGA CCTCTCCCAG CGCACGGAGT CGCAGGCGTC CAGCCTGCAG
CAGACCGCTG CCTCCATGGA GGAAATGAGC GCGACCATCC GCCAGAACGC CGACACGGCG
CGCACGGCCA GCCAGCTCGC CTCCACCGCC AGCCAAGCCG CGAGCCGCGG CGGCGACGTG
ATGGGCCAGG TGGTCGCGAC GATGCAGGAC ATCTCGGGCA GCTCCAGCAA GATCGCCGAC
ATCATCGGCG TGATCGACGG CATCGCTTTC CAGACCAACA TCCTGGCGCT GAACGCGGCC
GTGGAGGCTG CCCGCGCGGG CGAGCAGGGC CGCGGATTCG CCGTGGTGGC CGGAGAAGTG
CGCGCGCTGG CAGGGCGCAG CGCCGAGGCC GCCAAGGAAA TCAAGAACCT CATCGGCCAG
AGCGTGGAGA AGGTCGGCGC GGGCACGCGC CTGGTGGACG AAGCTGGCGC CACCATGTCC
GACATCGTGC AGCAGGTACA GCGCGTGAGC GATCTGATCG CCGAGATCGA CGCCGCCACG
CGCGAGCAGA GCGAGGGCAT CGGCCAGGTG AACGCGGCCG TGTCCCAGCT CGACCAGGCC
ACGCAGCAGA ACGCCGCGCT GGTGGAGGAG TCCGCTGCCG CGGCCGGCAG CCTGCAACAG
CAGGCCGTTC GCCTGACCGA GGCCGTCGGT GTTTTCCGCC TGTCGGGCAT GGCCGAGCGC
GCGGCACCTG CGCCGGCCCC TGTCCACGTC CCTGCCGCCA CGCCCCAGGC CAGTGCGGCA
CGCCCGGCAG CACGTCCCTC CCCTGCAGCC TCCCCGGCCC TGGGTGGCGG CAAGGCACCG
GCCGCGCAAC TGGGCAGCAC GCCCTCGGCC CCGTCCAGGC CCGCGCAACA GCCAGCGCCG
CGCGCGGCCA AGGCTCCCGC GGGTCCGGTT GCGGCCCCCA AGGCACCGGC CCTGCCGGCG
GCCGCGACCA GGCCCGCCGC GAAGCCGGCC GCGCACAGCA ACGCCGACGA CGACTGGACC
ACGTTCTGA
|
|---|
| Protein sequence | MQFLRRLSLG SRLALGFGLL LLLLAIITGL GIARMSTLDH TSQQITTELY AKANASQRMG
YLVLDIARAA RNIIILEDQA QMASNKTVID KNTAEFATTI AQLRQLEMAP EIRSLIDAVD
AKSKEYLAFT TDVTALGLSN QNLEGQKLLF GPRYKSQGEL LALLAQLVKQ YEGEMRQATA
SAHDTFVQSA TVLGVVALVA VLAGIAGAVM ITRSITVPMA RAVDVAHAVA EGDLTRTVDD
SGRDEAALLL QSLQTMNGNL TRVVHQIRQA SDSIATGSSQ IASGNADLSQ RTESQASSLQ
QTAASMEEMS ATIRQNADTA RTASQLASTA SQAASRGGDV MGQVVATMQD ISGSSSKIAD
IIGVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVAGEV RALAGRSAEA AKEIKNLIGQ
SVEKVGAGTR LVDEAGATMS DIVQQVQRVS DLIAEIDAAT REQSEGIGQV NAAVSQLDQA
TQQNAALVEE SAAAAGSLQQ QAVRLTEAVG VFRLSGMAER AAPAPAPVHV PAATPQASAA
RPAARPSPAA SPALGGGKAP AAQLGSTPSA PSRPAQQPAP RAAKAPAGPV AAPKAPALPA
AATRPAAKPA AHSNADDDWT TF
|
|---|
| |