| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5306 |
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| Symbol | tar |
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| ID | 4042167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2008162 |
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| End bp | 2009859 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980724 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_587434 |
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| Protein GI | 94314225 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00488588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0415564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAATG CATCACACTG TGATGCAACA ACATCCATAT CGCCGAGGAA TCGGCAACTG
GGGGTAGCTG TGAAAATCCG CGATCTGTCG ATCAAGACCA GGCTCCTTGC GGGGTTTGGC
GCGCTGGCAC TCATCGTGCT GGTGGTTTCG GGGCTGTCTT TGCGTGCGCT GAGTCAGGCG
ACCGACGGGT TCAGTGCCTA CATCAACGGG CTCAACGCCC GTGGCGAGAT GGCGTCCAAG
GTGCGCACGT CAGTCGATCG TCGCGCCATC GCCGCGCGCA ATCTCGTGCT GGTCACCACG
CCGGCAGACA TCAGTCTGGA AAAGGAAGCG GTGCTCAAGG CGCACGACGA CGTGAAGGCG
CGGCTGGGCC AGCTTAACGA GATGATCAAA GCCGAGGGTG TAAGCGAGAC CGCCCGAAAT
CTGGTGGCCG AGGTCGACCG CATCGAGGCG CGTTACGGTC CCGTGGCCAC GGCCATCGTC
GCCCTGGCGC TCGAGGGCAA GCGTGACGCC GCCATCGAGA AAATGAACAA CGAATGCCGC
CCACTGCTGG CCGAGCTGAT CAAGGCGACC AACACCTATG CCAGCTTCAC CAAGGAGCGC
CAGGACGAAA TGATCCGGAA GCTGCAGGAC GACTATGTCG CGCAGCGCAA TCTGCTGATC
ATCGTGTCGC TAGCCGCGGT GGCCTTTGCC ATGACCGGCG GCATGTTGCT GACCCGCGCG
ATCACCGGGC CGATAGAGCG CGCCGTGGGC GTGGCCAGCA CCGTCGCGCG CGGCGAGCTT
GGCATGCGCA TCGAGGTGAA TTCCACCGAC GAGACCGGCC GGCTGCTCGG CGCATTGCGT
GACATGAACG AGCGCTTGAG CGAAACGGTG GCGCGCGTGC GCGAGGGCAG TTCGAGCATC
GCGGTGGCCA CAGGCCAGAT CGCCGAGGGC AACATGGACC TGTCGAGCCG TACCGAGCAG
CAGGCGGCGT CACTGGAGGA AACCGCGGCG AGCATCGAGG AACTGGCGGC GACGGTCCGC
CACAACACCG AGAACGCCCG ACAAGCCAGC GAACTGGCCC GCAACGCCAC CGAAGTGGCC
CAACAGGGCA GCAGCACCGT GGGCCGCGTG GTCGATACGA TGGAAGGCAT CAGTGCAAGC
TCGACCAAGA TCGCGGAGAT CACCGGCATC ATCGAAGGCA TTGCATTCCA GACCAATATC
CTGGCGCTCA ACGCCGCAGT GGAAGCTGCG CGTGCCGGCG AGCAGGGGCG CGGGTTTGCC
GTGGTGGCCA GCGAGGTGCG TGGGCTCGCA CAGCGGTCGT CGAGTGCGGC CAAGGAAATC
AAGGAGTTGA TCGACGCATC GGTTGCCCAG GTGCAGGCTG GCTCGTCGTT GGCCAGCGAA
GCGGGCAAGA CCATGACCGA CGTCACGCAG GCCGTGGCTC GCGTCACCAA TATCGTCGAC
GAGATTGCCA CCGCGTCCGC CGAGCAGAAC CGTGGCATCG AGCAGGTGAA CCAGGCGATC
GTGCAGATCG ATCAGGTCAC GCAGCAGAAT GCCTCGCTGG TGCACGAGGC CGCGGAAGCG
TCGAAGGCGC TTGAGGAGCA GAGCCGGTCG CTGGACGATG CTGTGGCGTT CTTCAAGCTG
CCATCGGGCG GCGGGCGCCT TCATGACGCG CACCGCGCCG TCGTTGGTCA GCGGACGGCA
GGCATCGCGT TCACGTAA
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| Protein sequence | MLNASHCDAT TSISPRNRQL GVAVKIRDLS IKTRLLAGFG ALALIVLVVS GLSLRALSQA
TDGFSAYING LNARGEMASK VRTSVDRRAI AARNLVLVTT PADISLEKEA VLKAHDDVKA
RLGQLNEMIK AEGVSETARN LVAEVDRIEA RYGPVATAIV ALALEGKRDA AIEKMNNECR
PLLAELIKAT NTYASFTKER QDEMIRKLQD DYVAQRNLLI IVSLAAVAFA MTGGMLLTRA
ITGPIERAVG VASTVARGEL GMRIEVNSTD ETGRLLGALR DMNERLSETV ARVREGSSSI
AVATGQIAEG NMDLSSRTEQ QAASLEETAA SIEELAATVR HNTENARQAS ELARNATEVA
QQGSSTVGRV VDTMEGISAS STKIAEITGI IEGIAFQTNI LALNAAVEAA RAGEQGRGFA
VVASEVRGLA QRSSSAAKEI KELIDASVAQ VQAGSSLASE AGKTMTDVTQ AVARVTNIVD
EIATASAEQN RGIEQVNQAI VQIDQVTQQN ASLVHEAAEA SKALEEQSRS LDDAVAFFKL
PSGGGRLHDA HRAVVGQRTA GIAFT
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