| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4183 |
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| Symbol | |
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| ID | 7971920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4424110 |
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| End bp | 4425660 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794769 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_002946062 |
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| Protein GI | 239817152 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.278563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCC TTTCCAACAT GCGCATCGGA ACGCGCCTGG CCATCGGCTT CGGCCTGGTT
CTCGCGCTGA CCCTGGTCTC GGCCGCCTTC GCCCTGGTGA CCGCCCGAAG CAATGCCGAG
GCCACGCGCC AAATGATGCA AAGCCCGCTC GCGAAGGAGC GGCTGATCTC CGACTGGTAC
GTGCTGACCT ACTCGGCCAT CGCGCGTACC GCGATGATTG CCCGCACCAC CGACGAAACG
CTGCCCGTCA CCTTTGCCGA CGTCATCTCC GACAGCGTCA AGAAGGGCGG CGAAACCATG
GCCAAGGTCG AGGCCCTGCT GGTGACCGAC GTCGAGAAGT CGACCTTCAA GTCCATCGTC
GAGCTGCGGG CCAAGTACCA GGCCGCCAAG GACGCGGTGC AGAAGGCCAA GGCCAGCGGC
ACCCCGGGCG AAGCGGAGGC GGTTTTCAAG AACATCTTCC AGCCGGCCGC CAAGGCCTAT
GAAAACCGCG TGCTCGAACT GCTGGCGCTC GAGCGCAAGG CAATCGACGA CATGAGCCAT
GGGATCGACG AGGCCAACGA GCGAGGCTTT AACCTGCGCA TCGTTCTGAC GGTGCTCACG
CTGCTGATCG GCGCGGCCTG CGCCTTCCTG ATCGCGCGCA GCGTCACGCA GCCGCTGGGC
CGCGCGGTGA AGGTGGCCGA AACCGTGGCG AGCGGCGACC TGGGCTCGGT CATCGAAGCC
GACTCGCGCG ACGAGACCGG CCAGCTCATG CAGGCGCTGA AGCACATGAA CGAGAGCCTG
GCCAGGGTGG TGGGCGAAGT GCGCCAGGGT ACCGACACCA TCGCGACCGC ATCGGGCCAG
ATCGCGGCGG GCAATCGGGA CCTCTCGGCG CGTACCGAGG AGCAGGCCAG TTCGCTCGAG
CAGACGGCGG CCTCGATGGA AGAGCTCACG AGCACCGTCA AGCAGAACGC CGACAACGCG
CGCCAGGCCA ACCAGCTCGC GCTCTCGGCC TCCGAAGTGG CCGTGAAGGG CGGAGGTGTG
GTGGGGCAGG TGGTCGACAC CATGGCGTCG ATCAATGCAT CCTCCAAGAA GATCGTCGAC
ATCATCGGCG TGATCGATGG CATCGCGTTC CAGACCAACA TCCTTGCGCT CAACGCTGCT
GTCGAAGCCG CAAGAGCCGG TGAGCAGGGA AGAGGCTTCG CAGTCGTCGC CTCCGAAGTG
CGCAACCTCG CCCAGCGCTC GGGCGCAGCC GCCAAGGAAA TCAAGGGCCT GATCGACGAC
TCCGTGGACA AGGTCGAGGC CGGCAGCAGC CAGGTGGCCG AAGCGGGCCG CACGATGGAC
GAGATCGTGG ACAGCGTGAA ACGCGTGACC GACATCATGG GCGAGATCAC GGCGGCCAGC
CAGGAGCAGA GCACCGGCAT CGAGCAGGTG AACCAGGCCA TTGCGCAGAT GGACCAGGTC
ACGCAGCAGA ACGCGGCGCT GGTGGAAGAG GCGGCGGCCG CGGCGCAGTC GATGCAGGAG
CAGGCCGCGA GCCTGGTCGA GTCGGTCAGC GTATTCCGGC GCGCCGCCTG A
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| Protein sequence | MNFLSNMRIG TRLAIGFGLV LALTLVSAAF ALVTARSNAE ATRQMMQSPL AKERLISDWY
VLTYSAIART AMIARTTDET LPVTFADVIS DSVKKGGETM AKVEALLVTD VEKSTFKSIV
ELRAKYQAAK DAVQKAKASG TPGEAEAVFK NIFQPAAKAY ENRVLELLAL ERKAIDDMSH
GIDEANERGF NLRIVLTVLT LLIGAACAFL IARSVTQPLG RAVKVAETVA SGDLGSVIEA
DSRDETGQLM QALKHMNESL ARVVGEVRQG TDTIATASGQ IAAGNRDLSA RTEEQASSLE
QTAASMEELT STVKQNADNA RQANQLALSA SEVAVKGGGV VGQVVDTMAS INASSKKIVD
IIGVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVASEV RNLAQRSGAA AKEIKGLIDD
SVDKVEAGSS QVAEAGRTMD EIVDSVKRVT DIMGEITAAS QEQSTGIEQV NQAIAQMDQV
TQQNAALVEE AAAAAQSMQE QAASLVESVS VFRRAA
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