Gene Dtpsy_3407 details

Gene Information

• Locus tag: Dtpsy_3407
• ID: 7383646
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 3644301
• End bp: 3646262
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643656728
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002554834
• Protein GI: 222112570
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTCGC TTTCTCAGCG CCTGCCGCTG CTTTACAAAT TCCTCATCCT GGGCCTCGCC 
GGCATCCTCA TGAGCGCCGT GCCCACCTGG CTGTTCGTGA GCGGCGCGCT CGACGACCTG 
GCGCGCGCTC GCCACGAGGC CCGTGGCGCC CCGCCGCTGC TGGCGCTGCA CAAGGTGGTG 
CAGGGGCTGC AGGTGCACCG CGGCCTGTCC AACGGCATGC TGGGCGGCGA CGAGACCTTG 
GCCGCCCGGC GCCCGGCCGC GCGCGATGCG GTGAACAAAG CCTTCGCCGA GGCCACCGCC 
CGCCTGGACG CGGCGCAGGT GCCCGCGGCC CAGCGCGACG CCTGGCAGCG CGCCCAGCAG 
GCCTGGCAGC AGCTGGAGCC GGCCGTGGCC GCACGCTCGC TGCCGGCCGC GCAAAGCACG 
GCGCAGCACA CGGCGCTGAT CACGTCGCTG CTGCAGACCG GCGAGCAGCT GCTGCACAGC 
TACGAGCTGC AGCTGGACCC CGACTTCGCC ACCAACGCGC TGATCCAGGC CTCGCTGGTG 
CATGCGCCGC AGCTGGGTGA GAAGCTGGGC GTGATGCGCG CCCAGGGCGT GGGCTTCCTG 
GGCCGCGGCG GCGAGCTGCC GCTGGAGGCC AAGGGGCTGC TGCAGTCGCT GCGCCAGCGC 
GTGGTGGAGC TGCAGGGCGA CACGCTGCGC AACTTGGCGC GCGCCACCGA GGCGAGCCCT 
GCCTTTGCGG CCACGCTGGG CGCGCCCGCG CGCACGCTGG ACGCGCAAAT CACGGCCACG 
CTGGCCCTGG CCGACAAGGC CCTGCTGCAG GCCGACACGC TGACGCTGCC CGCGCAGGAG 
TATTTCGACA CCTACACCCG CACCATCGAC GCGCTGTATG CACTGAACGC CCAGGCCATG 
CAGGGCGTGG ACGAGGCCCT GCAGGCGCGC ATCGACCGCC TGCGCGCCAC GCTGGCATGG 
CAGGCGCTGG CACTGCTGGG CACGCTGGCG GGCGCCACGG TGCTGATGCT GGTCTTCGTG 
CGCTCCATCA CGCAGCCGGT GGCGCAGGCG GTGGAGCTGG CCCGCGCCGT GGCGCGCGGT 
GACTTGTCGG GCAGCGACAT CGCCCACGGC AGCAACGAAA TGGGCCGCCT GATCGCCGCG 
CTGTTGCAGA TGCGCCGCCA GCTCACCGAG GTGGTGGGCC GCGTGCGCCA GGGCGCGGAG 
GGCGTGGCCA CGGCCAGCGC GCAGATTGCG CAGGGCAACA CCGACCTGGC AGCCCGCACC 
GAAAGCCAGG CCAGCGCCCT GGAAGAGACC GCCGCATCGA TGGAGCAGAT GACCGCGACC 
GTGCGCCAGA ACGCCGACAG CGCCGCGCGT GCCAGCGAGC TGGCCACCAG CGCCAGCGGC 
GTGGCCGCGC AGGGTGGGGA GGTGGTGGCG CAGGTGGTGC AGACCATGCA CGGCATCCAC 
AGCTCGTCCG GCAAGATCGC GGACATCATC GGGGTGATCG ATTCGATCGC GTTCCAGACC 
AACATCCTGG CGCTGAACGC CGCCGTGGAG GCCGCACGTG CCGGCGAGCA GGGCCGCGGC 
TTTGCCGTGG TGGCCAGCGA GGTGCGCAGC CTGGCGCAGC GCAGCGCGGG CGCTGCGCGC 
GAGATCAAGG AGCTGATCTC CGCCAGCGTG CATGACGTGG AACGCGGCAA TGCGCTGGTG 
GAGCGCGCCG GCAAGACCAT GGAAGATGTG GTGACCGCCG TGCGCCGCGT CAACGACATC 
ATGGGCGAGA TCAGCAACGC CAGCCGCGAA CAGTCTCTGG GCGTGGCCCA GGTGGGCGAG 
GCCGTGAGCC AGATGGACCA GACCACGCAG CAGAACGCCG CGCTGGTCGA AGAGATGGCC 
GCCGCCGCCG CCAGCCTGCG CAGCCAGGCG CAGGAGCTGG TGGAGGGCGT GGCGGTGTTC 
AAGCTGGGCG AACGACCGCA CGCCGTTGCG CTATCCAATT AA 

 

Protein sequence

MTSLSQRLPL LYKFLILGLA GILMSAVPTW LFVSGALDDL ARARHEARGA PPLLALHKVV 
QGLQVHRGLS NGMLGGDETL AARRPAARDA VNKAFAEATA RLDAAQVPAA QRDAWQRAQQ 
AWQQLEPAVA ARSLPAAQST AQHTALITSL LQTGEQLLHS YELQLDPDFA TNALIQASLV 
HAPQLGEKLG VMRAQGVGFL GRGGELPLEA KGLLQSLRQR VVELQGDTLR NLARATEASP 
AFAATLGAPA RTLDAQITAT LALADKALLQ ADTLTLPAQE YFDTYTRTID ALYALNAQAM 
QGVDEALQAR IDRLRATLAW QALALLGTLA GATVLMLVFV RSITQPVAQA VELARAVARG 
DLSGSDIAHG SNEMGRLIAA LLQMRRQLTE VVGRVRQGAE GVATASAQIA QGNTDLAART 
ESQASALEET AASMEQMTAT VRQNADSAAR ASELATSASG VAAQGGEVVA QVVQTMHGIH 
SSSGKIADII GVIDSIAFQT NILALNAAVE AARAGEQGRG FAVVASEVRS LAQRSAGAAR 
EIKELISASV HDVERGNALV ERAGKTMEDV VTAVRRVNDI MGEISNASRE QSLGVAQVGE 
AVSQMDQTTQ QNAALVEEMA AAAASLRSQA QELVEGVAVF KLGERPHAVA LSN