Gene Ajs_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0160 
Symbol 
ID4670638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp179061 
End bp180800 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content71% 
IMG OID639837292 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_984491 
Protein GI121592595 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TCAGCATCGG CACCCGCCTG GGAGGCGGCT TCGCCCTTGT CCTGCTGCTG 
ATGGCCCTGA TGACGGCCTT TGGCGTATGG CGCCTGCAGA CCGTGGCGCA AGCCACCAAC
GAGATGACGC AGCAACCCCT GGCGGTGGAG CGCATGATCA GCGACTGGTA CCGCTATGTG
TACAGCGCGG CGCGGCGCAC CTCGGCCATC GTCAAGAGCA CGGACCCTTC GCTCGGCCAG
TTCTTCGCGG CAGACACCGC CACCTCCACG CGCGAATCGG CCGAGCTGCA AAAGCGTATC
GAGACGCTGC TCACCAGCGA CGAGGAAAAG GCCCTGTGGG CCGACATTCA GAAGGCGCGC
GTGACCTACC TGTCCTCGCG CGACCAGGCC GTGAAGGCCA AGGCCGAGGG CCAGCTGGAG
GAGGCCGAAC GCCTGCTCAC CCAGGTGTAC CTGCCCGCCA CCGACCAGTA CGTGGCGCTG
ATCCAGCGCC TGCTGGACAT GCAACGCGCC CGCATCGACG CCACGGCGCA GGGGATCAAT
GTCACCTATG GGCAAAGCCG GCTGTGGCTG ATCGTGCTGG GCGTGCTCGG CCTGGGCGCA
GGCGCCCTGT GCGCATGGTG GCTCACACGC GGCATCACGC GGCCGCTGGC GCAGGCCGTG
CAGGTGGCGC GCGCCGTGGC GGCCAACGAC CTCACCAGCC GCGTGCAGGT CGACTCGCGC
GACGAGACCG GCCAACTGCT GCAGGCGCTG CAGGAGATGA ACGCCAGCCT GTCGCAGGTG
GTGGCGCGCG TGCGCTCGGG CACCGACGGC ATCGCCACGG CGTCCAGCCA GCTCGACGCA
GGCAACCAGG ACCTGTCCTC GCGCACCGAG GAGCAGGCCA GCTCGCTGCA GGAAACCGCC
GCCTCGATGG AGCAGCTGAC CAGCACCGTG CGCCAGAACG CCGACAACGC GCGCCAGGCC
AACCAGTTGG CCTCCTCTGC CGCGCAGACG GCCACGCAGG GCGGCCAGGT GGTGGCCGGC
GTGGTGCAGA CCATGGGCGC CATCAACGCC AGCAGCCGCA AGATCAGCGA CATCATCGGC
GTGATCGACT CGATCGCCTT TCAGACCAAC ATCCTGGCGC TGAACGCCGC GGTGGAGGCC
GCGCGCGCCG GCGAGCAGGG CCGCGGCTTT GCCGTCGTGG CCGGCGAGGT GCGCGCGCTG
GCGCAGCGCA GCGCGGCTGC CGCCAAGGAC ATCAAGGGCC TGATCGGCGA CTCGGTCGCC
AAGGTGGAGG AAGGCTCCCA CCAGGTCGAG GAAGCCGGCC GCACCATGGA CGCCATCGTG
CAGAGCGTGC AGCGCGTGAG CGACCTGGTG GCCGAGATCA CCGCCGCCAG CCAAGAGCAG
AGCGCGGGCA TCGAGCAGGT GCACCAGGCC ATCACGCAGA TGGACCAGGT CACGCAGCAG
AACGCCGCAC TGGTGGAGGA AGCCACCGCC GCCACGGGCT CGCTCAAGGC CCAGGCTGGC
CAGTTGGCCC AGGCAGTGAG CGTGTTCCGC GTGGAAGGCC TGCAGGCCGC CCAGACGGCA
ACGGCAGCGG CAGCGGCAGC GCCCGCCCCC TTCCGCCGGC CCGCACCGGC CACAACGACC
ACAACGACCA AGCCCCCCGC AGCAGCGCGC ACGCTGGCGG CGCCCGCCCG CCCGCCGGCA
GCGGCCAAGG CGGCCCCGGC CACCGCGCGC CACAGCGACG ACGATTGGGA AGCCTTCTGA
 
Protein sequence
MKNLSIGTRL GGGFALVLLL MALMTAFGVW RLQTVAQATN EMTQQPLAVE RMISDWYRYV 
YSAARRTSAI VKSTDPSLGQ FFAADTATST RESAELQKRI ETLLTSDEEK ALWADIQKAR
VTYLSSRDQA VKAKAEGQLE EAERLLTQVY LPATDQYVAL IQRLLDMQRA RIDATAQGIN
VTYGQSRLWL IVLGVLGLGA GALCAWWLTR GITRPLAQAV QVARAVAAND LTSRVQVDSR
DETGQLLQAL QEMNASLSQV VARVRSGTDG IATASSQLDA GNQDLSSRTE EQASSLQETA
ASMEQLTSTV RQNADNARQA NQLASSAAQT ATQGGQVVAG VVQTMGAINA SSRKISDIIG
VIDSIAFQTN ILALNAAVEA ARAGEQGRGF AVVAGEVRAL AQRSAAAAKD IKGLIGDSVA
KVEEGSHQVE EAGRTMDAIV QSVQRVSDLV AEITAASQEQ SAGIEQVHQA ITQMDQVTQQ
NAALVEEATA ATGSLKAQAG QLAQAVSVFR VEGLQAAQTA TAAAAAAPAP FRRPAPATTT
TTTKPPAAAR TLAAPARPPA AAKAAPATAR HSDDDWEAF