Gene Ajs_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0364 
Symbol 
ID4671549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp372815 
End bp374557 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content69% 
IMG OID639837495 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_984693 
Protein GI121592797 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTCA GCAACCTCAA GGTCGGCACG CGCCTGGCCT TGTCCTTCGG CTTGGTTCTG 
CTCATCACCG TGGTCATCGC GGCGGTAGGC ATATGGCGTT TGCAGGAATT GGCAAGCGTC
ACCCACCAGC TCACCAGCAC GGACAACGAA CGGCTGCGCG CCGCCAGCAC ATGGCGGCAG
GCGATTGACC TGAACTGGGT GCGCACGCGC GCCGCCATCC TGGATGCGGA CACCTCCCAT
CTCTCGAGCT GGCAAAGCGA GATTGCCAAG ACCTCCGAAG AAGCATCCAA GGCGCAGGAG
GTGGTGGAGC GGCTGGTGAC CACCGACGAA GGGCGCCGCC TGCTCGCCGA CATTGCGAAG
ACGCGCGAAG CCTATCGCGG CCCGCGGGCT GAATTGCTCA AGCGCAAGGC TGCCGGCGAG
AGTGTGGGTG AGTTGCTCGA CAGTCAACTC AAGCCGCTGG CCGACGCTTA CCTACAGTCC
ATCGTTGCCA TGGAACAGCG CCAGCGCGCG CTCTACGAAA GCACCCGCGA CAACGCTGCC
AAGCAGGCCA CGCGCAGTCG CGCCATCCTG ATGGTCGTGA CCGCAGTGGC GCTGCTGGTG
GGCGCGGGCG CCGCGATCTT GTTGAGCCGC TCCGTGACCG GGCCCTTGCA GTTGGCCGTG
CGCGGCGCAG GCTTGATCGC CGAGGGCGAC CTCACCCAGT CCATCCAGGC CCACGGCCGC
GACGAAGCCG CGGCGCTGCT GAAGGCACTG GGCCACATGC AGGGCAACCT CGCTCGCGTA
GTGGCCGGCG TGCGCGCCAA TGCGGAGAGC GTCGCGTCGG CCAGCGCGGA GATCTCGCAG
GGCAACCACG ACCTGTCCGG CCGCACCGAG AGCCAGGCCA GCGCCCTGGA AGAAACGGCC
GCCTCCATGG AGCAGTTGGG CGCCACCGTG CGCCAGAACG CCGACAACGC CCGCCAGGCC
AACCAGCTCG CCATGAATGC CAGCACCGTC GCCGTGCAGG GCGGCGAGGT GGTCTCCGAG
GTGGTGGACA CCATGCGCGG CATCAATGAG TCCAGCCGCA AGATCGCCGA CATCATCGGG
GTGATCGATG GCATTGCCTT CCAGACCAAC ATCCTGGCGC TGAATGCCGC CGTGGAAGCC
GCGCGTGCCG GTGAGCAAGG CCGCGGGTTT GCCGTGGTGG CCGGCGAGGT GCGCGCGCTG
GCGCAGCGCT CTGCCGAGGC CGCCAAGGAG ATCAAGCAGC TCATCACCGC CAGCGTGGAG
CGCGTGGAGC AGGGCTCGCA GCTGGTGGAC AAGGCCGGTG CCACCATGAC CGAGGTGGTC
ACCGCCATTC GCCGCGTGAC CGACATCATG GGAGAGATCA GCGCCGCCAG CAGCGAACAA
AGCGCGGGCG TGGCCCAGGT GGGCGAGGCC ATCACCCAGA TGGACCAGGC CACGCAGCAG
AACGCCGCGC TGGTCGAGGA GATGGCCGCC GCCGCCAGCA GCCTCAGCGG CCAGGCCCGC
GAGCTCGTCG AGGCCGTCGC CGTGTTCAAG CTGGCGCAGA AGGCCTCCGC CCTGCCGCGC
ATGGCGCCCG TGCATGCCAC GGCTGCGCCG GCTCCCGTAC CCGCCACCTC CGCGACACCC
GCCGCCCCTG CCCGGCCCGC CACGCCGCCG GCGGCCGCCT TGGCACGTCC GGCAGCAGCG
CGCCCTCAAC CCGCGCAGGC GGCCCGCACG ACTGCCGATA ACGACGAATG GGAGAGCTTC
TGA
 
Protein sequence
MHLSNLKVGT RLALSFGLVL LITVVIAAVG IWRLQELASV THQLTSTDNE RLRAASTWRQ 
AIDLNWVRTR AAILDADTSH LSSWQSEIAK TSEEASKAQE VVERLVTTDE GRRLLADIAK
TREAYRGPRA ELLKRKAAGE SVGELLDSQL KPLADAYLQS IVAMEQRQRA LYESTRDNAA
KQATRSRAIL MVVTAVALLV GAGAAILLSR SVTGPLQLAV RGAGLIAEGD LTQSIQAHGR
DEAAALLKAL GHMQGNLARV VAGVRANAES VASASAEISQ GNHDLSGRTE SQASALEETA
ASMEQLGATV RQNADNARQA NQLAMNASTV AVQGGEVVSE VVDTMRGINE SSRKIADIIG
VIDGIAFQTN ILALNAAVEA ARAGEQGRGF AVVAGEVRAL AQRSAEAAKE IKQLITASVE
RVEQGSQLVD KAGATMTEVV TAIRRVTDIM GEISAASSEQ SAGVAQVGEA ITQMDQATQQ
NAALVEEMAA AASSLSGQAR ELVEAVAVFK LAQKASALPR MAPVHATAAP APVPATSATP
AAPARPATPP AAALARPAAA RPQPAQAART TADNDEWESF