More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2225 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  71.08 
 
 
552 aa  731    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  100 
 
 
583 aa  1159    Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  57.55 
 
 
542 aa  562  1.0000000000000001e-159  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  57.28 
 
 
513 aa  538  1e-151  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  58.35 
 
 
581 aa  535  1e-151  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  53.42 
 
 
578 aa  533  1e-150  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  58.35 
 
 
579 aa  534  1e-150  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  54.15 
 
 
595 aa  530  1e-149  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  56.47 
 
 
513 aa  529  1e-149  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  55.58 
 
 
580 aa  518  1e-146  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  51.91 
 
 
589 aa  511  1e-143  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
559 aa  503  1e-141  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008752  Aave_0227  methyl-accepting chemotaxis sensory transducer  57.56 
 
 
592 aa  499  1e-140  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  51.46 
 
 
559 aa  498  1e-139  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  47.85 
 
 
569 aa  488  1e-136  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  51.72 
 
 
523 aa  483  1e-135  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  49.66 
 
 
551 aa  481  1e-134  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  53.27 
 
 
592 aa  478  1e-134  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  55.66 
 
 
577 aa  474  1e-132  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  51.86 
 
 
508 aa  472  1e-132  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  54.78 
 
 
516 aa  469  1.0000000000000001e-131  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  48.36 
 
 
551 aa  470  1.0000000000000001e-131  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  54.53 
 
 
620 aa  471  1.0000000000000001e-131  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  51.35 
 
 
525 aa  465  1e-129  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  51.83 
 
 
537 aa  460  9.999999999999999e-129  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  62.7 
 
 
596 aa  455  1.0000000000000001e-126  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  63.97 
 
 
579 aa  439  9.999999999999999e-123  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  51.18 
 
 
557 aa  437  1e-121  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
586 aa  437  1e-121  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  52.54 
 
 
511 aa  429  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  66.57 
 
 
527 aa  431  1e-119  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  46.23 
 
 
584 aa  426  1e-118  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  46.4 
 
 
553 aa  424  1e-117  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  46.18 
 
 
554 aa  423  1e-117  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  56.62 
 
 
532 aa  421  1e-116  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  75.59 
 
 
578 aa  416  9.999999999999999e-116  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  52.38 
 
 
589 aa  417  9.999999999999999e-116  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  62.47 
 
 
579 aa  414  1e-114  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  58.04 
 
 
598 aa  413  1e-114  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  48.29 
 
 
573 aa  410  1e-113  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  47.52 
 
 
584 aa  408  1.0000000000000001e-112  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  43.65 
 
 
589 aa  403  1e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  46.17 
 
 
591 aa  403  1e-111  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  59.63 
 
 
614 aa  399  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  70.19 
 
 
471 aa  399  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  58.38 
 
 
532 aa  396  1e-109  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  45.92 
 
 
575 aa  396  1e-109  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  61.94 
 
 
537 aa  395  1e-109  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  72.09 
 
 
659 aa  397  1e-109  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  47.32 
 
 
572 aa  393  1e-108  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  52.77 
 
 
580 aa  392  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  46.9 
 
 
591 aa  395  1e-108  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  71.15 
 
 
589 aa  392  1e-107  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  46.86 
 
 
650 aa  392  1e-107  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  55.71 
 
 
535 aa  392  1e-107  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  47.18 
 
 
586 aa  387  1e-106  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  67.49 
 
 
653 aa  387  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  44.54 
 
 
554 aa  387  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  46.29 
 
 
548 aa  388  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  67.49 
 
 
653 aa  387  1e-106  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  45.08 
 
 
605 aa  384  1e-105  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  46.32 
 
 
550 aa  378  1e-103  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  67.63 
 
 
642 aa  377  1e-103  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  57.25 
 
 
536 aa  376  1e-103  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_012880  Dd703_3863  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
560 aa  376  1e-103  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.59 
 
 
584 aa  375  1e-102  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  51.01 
 
 
584 aa  374  1e-102  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
605 aa  373  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  40.81 
 
 
556 aa  369  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  43.88 
 
 
543 aa  370  1e-101  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
554 aa  371  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
549 aa  370  1e-101  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
554 aa  370  1e-101  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1934  methyl-accepting chemotaxis sensory transducer  43.66 
 
 
560 aa  371  1e-101  Methylobacillus flagellatus KT  Bacteria  normal  0.718562  normal 
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
589 aa  369  1e-100  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  50.74 
 
 
668 aa  367  1e-100  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  47.41 
 
 
581 aa  366  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
618 aa  367  1e-100  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
556 aa  366  1e-100  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3865  methyl-accepting chemotaxis sensory transducer  41.32 
 
 
551 aa  366  1e-100  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  55.39 
 
 
585 aa  365  1e-100  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
553 aa  368  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  41.51 
 
 
556 aa  367  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
559 aa  367  1e-100  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.34 
 
 
566 aa  365  1e-99  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
622 aa  364  2e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  40.2 
 
 
556 aa  365  2e-99  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4047  methyl-accepting chemotaxis sensory transducer  41.02 
 
 
559 aa  363  3e-99  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  58.24 
 
 
554 aa  363  4e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  52.43 
 
 
651 aa  363  4e-99  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  58.38 
 
 
559 aa  363  5.0000000000000005e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.05 
 
 
598 aa  363  5.0000000000000005e-99  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  52.43 
 
 
667 aa  362  8e-99  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  44.56 
 
 
594 aa  362  1e-98  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  50.51 
 
 
653 aa  361  2e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  48.37 
 
 
608 aa  361  2e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_011992  Dtpsy_2762  methyl-accepting chemotaxis sensory transducer  47.75 
 
 
584 aa  361  2e-98  Acidovorax ebreus TPSY  Bacteria  normal  0.636912  n/a   
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  49.35 
 
 
536 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  47 
 
 
615 aa  360  3e-98  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  47 
 
 
615 aa  360  3e-98  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
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