Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2481 |
Symbol | |
ID | 3962974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2734927 |
End bp | 2736666 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637917300 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_523729 |
Protein GI | 89901258 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.37743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAA GCCTCAAGTT ACCTCTGGCG TTTGCCTGGG CGCAGCTCTT TCTGTTCTGT GCGGCGCTGT TCGGCATCTA CAGCTTGAAC CAATCGCTTG GGACGTTTGA AAATGCGGTG GCCGCCACAG CCAACACCAA TCACGAGGCC CAGGTCGCTG ATATGGCGCT GGTTTTCAAG ACCCAGGTAC TGGAGTGGAA GAACGTCCTG CTGCGCGGTT CAAACGCTGA AAAGATGAGC ACACATTGGG CCGGTTTTGT TCAGCATGAG CGCGATGTGG CAGAGCGGGC CAAGAAGCTG ATGGCCGCAT TACCCGAGGG CGAAAGCCGG GCGCTGGTGG CTAAGTTCGC GCAGGCGCAC ACCCAAATGG GGGAGAACTA TCGCAAGGGT CTGGAATTTT TCAAGGCCGC CAATATGGAT CCGGCCGGTG GCGACAACTC GGCGCAGGAC ATGGACCGGG AGCCCTTGAA GCTGCTTGAG CAGGCGGTTG CCCGGATCAA GGCCGACAAT GCCGCCGTCT TGGCCCAGGC AGCGGCATCG GGCCGCCGGG CAACCCTCAT CAGCGTGGTT CTCATGCTGC TGGTGTGCGC CGGTGGCATC GTGTTCGGTA TTTTGTTGAG CCGAAGCATC ATCAAGCAGC TCGGGGGCGA GCCGCAGGAT GCCGTGAACC TGGCACAGCG CGTGGCCCAG GGTGATCTGA GCGAGGAAAA CATGCTCAAG GCAGGCGACA CCAGCAGCCT GATGGCCCAT CTGGATCTGA TGCAGGCCAG CCTGGCCCGG GTCGTTGCCA ATGTTCACCG CGGCTCCGAG GGCCTGCAGG TCGCCAGCGC CGAAATTGCG CAGGGTAACC AGGATCTGAG TGCCCGCACG GAGAGTCAGG CCAGCGCGCT GGAACAAACC GCGTCTTCGA TGGAGCAACT CAGCGCCGCC GTCAAACAAA ATGCCGACAG CGCGCGCCAG GCCAACCAAC TGGCTTTGAG TGCCAGCGCG GTGGCCGTCA AGGGCGGCGA AGTGGTGGCG CAGGTGGTGG ACACCATGAA GGGCATCAAT GATGCCTCAC GCAAAATCTC AGACATCATC AGTGTGATTG ATGGCATTGC GTTCCAGACC AATATCCTGG CTTTGAACGC GGCGGTGGAA GCCGCCCGGG CCGGTGAACA GGGGCGTGGC TTTGCGGTGG TGGCCAGCGA GGTGCGCAGC CTGGCCGGGC GTTCTGCCGA AGCAGCGAAA GAAATCAAGT CATTGATCAA CGCCAGTGTG GAGCGGGTGG AGCAGGGCAG CACGCTGGTG GACCAGGCCG GCGTCACCAT GGCCGAGGTG GTGAGCAGCA TTCACCGTGT GACCGACATC ATGGGCGAGA TCAGCTCCGC CAGCAGCGAG CAGGCGCTGG GCGTGTCGCA AGTGGGTGAG GCGGTGACTC AGATGGACCA GTCCACGCAG CAAAATGCCG CGTTGGTGGA GCAAATGGCG GCTGCAGCCA ACAGCCTCAA GTCGCAGGCG CAAGATCTGG TGCAAACGGT GGCCGTGTTC AAGCTCGTCA GCGTTGACTC GCCCCGGCGG GCACCACCAC CGGCAGCGCT GCGCTCGAAT CAGCCTGCCC CGGGTGTCCG CCAGCCCGTC GCGCGCCGCG CCCTGGCGGC GCCGTCGTCA GGTGCTGCGT TGAAGAATTC CGCCAAAGCG CCGGCGAAAA CGCTCGCTAA AGACGCCCCA GCGGGTGAAG CGGATTGGGA AGCTTTCTGA
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Protein sequence | MKLSLKLPLA FAWAQLFLFC AALFGIYSLN QSLGTFENAV AATANTNHEA QVADMALVFK TQVLEWKNVL LRGSNAEKMS THWAGFVQHE RDVAERAKKL MAALPEGESR ALVAKFAQAH TQMGENYRKG LEFFKAANMD PAGGDNSAQD MDREPLKLLE QAVARIKADN AAVLAQAAAS GRRATLISVV LMLLVCAGGI VFGILLSRSI IKQLGGEPQD AVNLAQRVAQ GDLSEENMLK AGDTSSLMAH LDLMQASLAR VVANVHRGSE GLQVASAEIA QGNQDLSART ESQASALEQT ASSMEQLSAA VKQNADSARQ ANQLALSASA VAVKGGEVVA QVVDTMKGIN DASRKISDII SVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVASEVRS LAGRSAEAAK EIKSLINASV ERVEQGSTLV DQAGVTMAEV VSSIHRVTDI MGEISSASSE QALGVSQVGE AVTQMDQSTQ QNAALVEQMA AAANSLKSQA QDLVQTVAVF KLVSVDSPRR APPPAALRSN QPAPGVRQPV ARRALAAPSS GAALKNSAKA PAKTLAKDAP AGEADWEAF
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