More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2481 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  100 
 
 
579 aa  1154    Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  52.33 
 
 
511 aa  461  9.999999999999999e-129  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  49.67 
 
 
589 aa  460  9.999999999999999e-129  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  64.18 
 
 
596 aa  457  1e-127  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  75 
 
 
578 aa  454  1.0000000000000001e-126  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  67.1 
 
 
586 aa  452  1.0000000000000001e-126  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  64.38 
 
 
579 aa  442  1e-123  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  50.68 
 
 
661 aa  439  9.999999999999999e-123  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  50.68 
 
 
661 aa  439  9.999999999999999e-123  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  69.42 
 
 
542 aa  441  9.999999999999999e-123  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  50.68 
 
 
563 aa  439  9.999999999999999e-123  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  49.63 
 
 
542 aa  440  9.999999999999999e-123  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  49.63 
 
 
542 aa  438  1e-121  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  49.63 
 
 
542 aa  438  1e-121  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  49.63 
 
 
542 aa  438  1e-121  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  49.44 
 
 
666 aa  433  1e-120  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  50.91 
 
 
537 aa  429  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  64.3 
 
 
583 aa  430  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  48.61 
 
 
578 aa  427  1e-118  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  68.45 
 
 
552 aa  427  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  70.72 
 
 
532 aa  424  1e-117  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010002  Daci_5361  methyl-accepting chemotaxis sensory transducer  48.05 
 
 
508 aa  424  1e-117  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1234  methyl-accepting chemotaxis transmembrane protein  51.64 
 
 
514 aa  417  9.999999999999999e-116  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  51.47 
 
 
580 aa  416  9.999999999999999e-116  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  65.35 
 
 
573 aa  415  1e-114  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  63.03 
 
 
584 aa  403  1e-111  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  69.44 
 
 
511 aa  399  9.999999999999999e-111  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  64.71 
 
 
527 aa  399  9.999999999999999e-111  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  77.78 
 
 
592 aa  394  1e-108  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  61.95 
 
 
589 aa  395  1e-108  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  46.21 
 
 
535 aa  388  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  61.62 
 
 
598 aa  380  1e-104  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  67.41 
 
 
659 aa  379  1e-104  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  66.46 
 
 
557 aa  378  1e-103  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  67.79 
 
 
515 aa  371  1e-101  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  54.66 
 
 
532 aa  369  1e-101  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  64.46 
 
 
653 aa  369  1e-101  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  64.46 
 
 
653 aa  369  1e-101  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  68.18 
 
 
471 aa  369  1e-101  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  70.13 
 
 
614 aa  365  1e-100  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  59.03 
 
 
537 aa  365  2e-99  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  55.42 
 
 
581 aa  363  3e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  54.82 
 
 
559 aa  361  2e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_008752  Aave_3444  methyl-accepting chemotaxis sensory transducer  63.66 
 
 
517 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.679068  normal  0.0634638 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.73 
 
 
566 aa  357  2.9999999999999997e-97  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  62.85 
 
 
612 aa  356  5e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  65.92 
 
 
589 aa  356  6.999999999999999e-97  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  43.95 
 
 
559 aa  355  1e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  56.15 
 
 
597 aa  355  1e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  64.5 
 
 
539 aa  352  8e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  44.51 
 
 
547 aa  352  1e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  47.79 
 
 
579 aa  350  4e-95  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  58.1 
 
 
598 aa  350  5e-95  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.06 
 
 
564 aa  349  7e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  59.43 
 
 
541 aa  348  2e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  42.72 
 
 
572 aa  347  3e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  46.17 
 
 
558 aa  346  8e-94  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  59.82 
 
 
519 aa  344  2e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  44.83 
 
 
618 aa  344  2e-93  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  58.51 
 
 
553 aa  344  2e-93  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  59.45 
 
 
576 aa  343  4e-93  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  43.98 
 
 
559 aa  343  4e-93  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  52.26 
 
 
598 aa  343  4e-93  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  54.05 
 
 
581 aa  342  8e-93  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
573 aa  341  2e-92  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  55.41 
 
 
594 aa  341  2.9999999999999998e-92  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  54.75 
 
 
554 aa  340  4e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.76 
 
 
579 aa  340  4e-92  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
634 aa  339  7e-92  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
634 aa  339  7e-92  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  54.81 
 
 
548 aa  339  9e-92  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  44.7 
 
 
605 aa  338  9.999999999999999e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  55.39 
 
 
585 aa  337  2.9999999999999997e-91  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  52.67 
 
 
580 aa  337  2.9999999999999997e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  61.4 
 
 
613 aa  337  2.9999999999999997e-91  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  57.48 
 
 
554 aa  335  1e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  53.24 
 
 
752 aa  335  2e-90  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  59.21 
 
 
586 aa  335  2e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  60.13 
 
 
519 aa  335  2e-90  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  63.58 
 
 
536 aa  335  2e-90  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
605 aa  335  2e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
544 aa  334  3e-90  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.77 
 
 
519 aa  333  4e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.09 
 
 
519 aa  333  5e-90  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  56.27 
 
 
515 aa  333  7.000000000000001e-90  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  53.03 
 
 
621 aa  332  9e-90  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  60.12 
 
 
525 aa  332  1e-89  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  64.97 
 
 
642 aa  332  1e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  58.54 
 
 
584 aa  332  2e-89  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  57.32 
 
 
566 aa  331  2e-89  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  52.51 
 
 
569 aa  331  2e-89  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  63.08 
 
 
521 aa  331  2e-89  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.98 
 
 
515 aa  330  3e-89  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  63.44 
 
 
521 aa  330  4e-89  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4047  methyl-accepting chemotaxis sensory transducer  52.54 
 
 
559 aa  330  5.0000000000000004e-89  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  63.49 
 
 
433 aa  330  6e-89  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  45.29 
 
 
594 aa  329  9e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  57.53 
 
 
520 aa  328  1.0000000000000001e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.89 
 
 
598 aa  328  1.0000000000000001e-88  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  61.66 
 
 
650 aa  328  2.0000000000000001e-88  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
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