More than 300 homologs were found in PanDaTox collection
for query gene Tbd_1619 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007404  Tbd_1619  chemotaxis sensory transducer  100 
 
 
559 aa  1112    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  83.86 
 
 
572 aa  580  1e-164  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  58.44 
 
 
586 aa  470  1.0000000000000001e-131  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  63.48 
 
 
559 aa  449  1e-125  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  49.74 
 
 
559 aa  412  1e-114  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  63.68 
 
 
579 aa  404  1e-111  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.18 
 
 
515 aa  397  1e-109  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  62.28 
 
 
585 aa  395  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  65.48 
 
 
515 aa  398  1e-109  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  56.6 
 
 
579 aa  392  1e-108  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.96 
 
 
566 aa  391  1e-107  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  64.88 
 
 
515 aa  387  1e-106  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  60.26 
 
 
594 aa  388  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  49.35 
 
 
569 aa  388  1e-106  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  64.4 
 
 
597 aa  385  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
579 aa  385  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  56.43 
 
 
586 aa  380  1e-104  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  53.05 
 
 
556 aa  380  1e-104  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  72.01 
 
 
680 aa  382  1e-104  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  64.82 
 
 
578 aa  377  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  54.61 
 
 
584 aa  377  1e-103  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  58.45 
 
 
573 aa  378  1e-103  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  54.22 
 
 
581 aa  375  1e-102  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  62.73 
 
 
573 aa  374  1e-102  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  63.82 
 
 
621 aa  372  1e-102  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  55.15 
 
 
589 aa  375  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  63.08 
 
 
558 aa  374  1e-102  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  65.45 
 
 
613 aa  374  1e-102  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  61.89 
 
 
755 aa  374  1e-102  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  57.59 
 
 
629 aa  371  1e-101  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  54.98 
 
 
583 aa  369  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  52.8 
 
 
595 aa  371  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  51.99 
 
 
556 aa  372  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  60.33 
 
 
585 aa  367  1e-100  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  60.88 
 
 
576 aa  365  1e-100  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
591 aa  366  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.27 
 
 
618 aa  365  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  53.61 
 
 
542 aa  367  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  61.04 
 
 
532 aa  367  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  66.77 
 
 
513 aa  367  1e-100  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  53.79 
 
 
580 aa  367  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.77 
 
 
513 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  65.14 
 
 
733 aa  367  1e-100  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  67.2 
 
 
513 aa  365  2e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  70.55 
 
 
557 aa  365  2e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  61.58 
 
 
433 aa  365  2e-99  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  60.91 
 
 
520 aa  363  3e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.92 
 
 
519 aa  363  3e-99  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  49.05 
 
 
615 aa  363  4e-99  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  49.05 
 
 
615 aa  363  4e-99  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  50.25 
 
 
548 aa  363  5.0000000000000005e-99  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  46.88 
 
 
577 aa  363  6e-99  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  60.99 
 
 
519 aa  362  7.0000000000000005e-99  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  55.85 
 
 
634 aa  362  8e-99  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  55.85 
 
 
634 aa  362  8e-99  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  61.21 
 
 
752 aa  362  1e-98  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  52.25 
 
 
555 aa  362  1e-98  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  45.25 
 
 
537 aa  362  1e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
596 aa  362  1e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0110  methyl-accepting chemotaxis sensory transducer  52.12 
 
 
548 aa  360  3e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.975087  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  69.58 
 
 
797 aa  360  4e-98  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  63.64 
 
 
740 aa  360  4e-98  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1934  methyl-accepting chemotaxis sensory transducer  65.5 
 
 
560 aa  360  5e-98  Methylobacillus flagellatus KT  Bacteria  normal  0.718562  normal 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.29 
 
 
519 aa  360  5e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.59 
 
 
517 aa  359  6e-98  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  54.15 
 
 
578 aa  359  6e-98  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.03 
 
 
598 aa  359  9e-98  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  59.58 
 
 
544 aa  358  9.999999999999999e-98  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_012912  Dd1591_4046  methyl-accepting chemotaxis sensory transducer  54.02 
 
 
560 aa  358  1.9999999999999998e-97  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  59.68 
 
 
519 aa  358  1.9999999999999998e-97  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  58.01 
 
 
541 aa  358  1.9999999999999998e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_007435  BURPS1710b_A1029  methyl-accepting chemotaxis protein  45.49 
 
 
562 aa  357  3.9999999999999996e-97  Burkholderia pseudomallei 1710b  Bacteria  normal  0.815966  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  45.42 
 
 
591 aa  357  3.9999999999999996e-97  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  58.79 
 
 
605 aa  357  3.9999999999999996e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  60.95 
 
 
775 aa  356  5e-97  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  58.79 
 
 
605 aa  356  5e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  45.49 
 
 
562 aa  356  5.999999999999999e-97  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  61.7 
 
 
553 aa  356  5.999999999999999e-97  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  44.56 
 
 
594 aa  355  7.999999999999999e-97  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  49.23 
 
 
589 aa  356  7.999999999999999e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  54.59 
 
 
567 aa  356  7.999999999999999e-97  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  45.64 
 
 
525 aa  355  1e-96  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
516 aa  355  1e-96  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  48.07 
 
 
608 aa  354  2e-96  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  56.45 
 
 
580 aa  355  2e-96  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3864  methyl-accepting chemotaxis sensory transducer  52.99 
 
 
543 aa  354  2e-96  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  63.84 
 
 
753 aa  353  2.9999999999999997e-96  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  50.26 
 
 
556 aa  353  5e-96  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  64.95 
 
 
745 aa  353  5e-96  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  66.12 
 
 
705 aa  353  5.9999999999999994e-96  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  61.26 
 
 
394 aa  353  5.9999999999999994e-96  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  54.85 
 
 
587 aa  353  7e-96  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  50 
 
 
556 aa  352  8e-96  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4524  methyl-accepting chemotaxis sensory transducer  59.62 
 
 
599 aa  352  1e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  63.66 
 
 
546 aa  352  1e-95  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  46.37 
 
 
592 aa  352  1e-95  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  54.18 
 
 
650 aa  351  2e-95  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  55.95 
 
 
575 aa  351  2e-95  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_009078  BURPS1106A_A2620  methyl-accepting chemotaxis protein  45.89 
 
 
562 aa  351  2e-95  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  43.81 
 
 
598 aa  351  2e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
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