More than 300 homologs were found in PanDaTox collection
for query gene PXO_00039 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  64.46 
 
 
797 aa  645    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  100 
 
 
775 aa  1554    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  66.16 
 
 
793 aa  649    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  44.08 
 
 
752 aa  503  1e-141  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  66.75 
 
 
755 aa  483  1e-135  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  66.67 
 
 
733 aa  480  1e-134  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  70.45 
 
 
745 aa  467  9.999999999999999e-131  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  39.27 
 
 
792 aa  465  1e-129  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  68.15 
 
 
753 aa  462  9.999999999999999e-129  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  67.53 
 
 
740 aa  461  9.999999999999999e-129  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  52.91 
 
 
679 aa  459  1e-127  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  65.48 
 
 
705 aa  457  1e-127  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  47.53 
 
 
945 aa  452  1.0000000000000001e-126  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
656 aa  451  1e-125  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  49.34 
 
 
656 aa  451  1e-125  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  49.25 
 
 
657 aa  449  1e-125  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  50.56 
 
 
654 aa  448  1.0000000000000001e-124  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.89 
 
 
665 aa  442  1e-123  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  49.45 
 
 
664 aa  444  1e-123  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  52.05 
 
 
679 aa  446  1e-123  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  48.8 
 
 
664 aa  441  9.999999999999999e-123  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  80.99 
 
 
691 aa  436  1e-121  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  48.52 
 
 
657 aa  439  1e-121  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  70.96 
 
 
706 aa  431  1e-119  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.49 
 
 
1123 aa  430  1e-119  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  46.99 
 
 
767 aa  426  1e-118  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  68.93 
 
 
843 aa  426  1e-118  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  45.91 
 
 
863 aa  423  1e-117  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  46.76 
 
 
860 aa  426  1e-117  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.52 
 
 
864 aa  421  1e-116  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.46 
 
 
701 aa  415  1e-114  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  46.63 
 
 
793 aa  408  1.0000000000000001e-112  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  46.68 
 
 
779 aa  401  9.999999999999999e-111  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.91 
 
 
845 aa  397  1e-109  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  41.77 
 
 
610 aa  376  1e-103  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  41.36 
 
 
678 aa  378  1e-103  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  47.3 
 
 
1029 aa  375  1e-102  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  57.02 
 
 
707 aa  350  4e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  62.13 
 
 
583 aa  340  7e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  67.53 
 
 
592 aa  340  8e-92  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  60.95 
 
 
559 aa  337  2.9999999999999997e-91  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  64.36 
 
 
598 aa  337  5e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  61.11 
 
 
559 aa  335  2e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  57.51 
 
 
579 aa  335  2e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  63.41 
 
 
542 aa  334  3e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  63.48 
 
 
566 aa  333  8e-90  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
572 aa  333  9e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  64.04 
 
 
562 aa  332  1e-89  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  60.92 
 
 
579 aa  332  1e-89  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  59.69 
 
 
589 aa  332  2e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  56.46 
 
 
569 aa  331  4e-89  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  56.97 
 
 
557 aa  330  6e-89  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  56.97 
 
 
557 aa  330  6e-89  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  62 
 
 
527 aa  329  1.0000000000000001e-88  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  62.5 
 
 
552 aa  328  2.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  58.93 
 
 
578 aa  329  2.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  56.68 
 
 
557 aa  329  2.0000000000000001e-88  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  60.64 
 
 
559 aa  328  3e-88  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  61.97 
 
 
596 aa  327  6e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  62.21 
 
 
642 aa  325  1e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  61.13 
 
 
580 aa  326  1e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  65.16 
 
 
586 aa  325  2e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.56 
 
 
566 aa  325  2e-87  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  57.38 
 
 
575 aa  324  3e-87  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  62.41 
 
 
578 aa  325  3e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.25 
 
 
608 aa  323  6e-87  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  67.25 
 
 
680 aa  323  6e-87  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  65.55 
 
 
584 aa  323  7e-87  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.55 
 
 
584 aa  323  9.000000000000001e-87  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  53.5 
 
 
579 aa  323  9.999999999999999e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  61.08 
 
 
584 aa  322  9.999999999999999e-87  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  66.2 
 
 
617 aa  322  1.9999999999999998e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  58.64 
 
 
586 aa  322  1.9999999999999998e-86  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  60.68 
 
 
585 aa  321  3e-86  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  61.77 
 
 
573 aa  321  3.9999999999999996e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.55 
 
 
609 aa  321  3.9999999999999996e-86  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  60 
 
 
594 aa  320  5e-86  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  66.43 
 
 
577 aa  320  6e-86  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
589 aa  320  9e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  67.01 
 
 
629 aa  319  1e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  59.58 
 
 
583 aa  319  1e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  59.57 
 
 
561 aa  319  1e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  60.38 
 
 
659 aa  319  1e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  56.08 
 
 
537 aa  318  2e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  57.4 
 
 
561 aa  319  2e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  57.39 
 
 
553 aa  317  4e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  58.75 
 
 
580 aa  317  4e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  57.27 
 
 
553 aa  317  4e-85  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  57.39 
 
 
553 aa  317  5e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  57.39 
 
 
553 aa  317  5e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  63.89 
 
 
513 aa  316  9e-85  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  59.03 
 
 
653 aa  316  9.999999999999999e-85  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  59.03 
 
 
653 aa  316  9.999999999999999e-85  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  63.99 
 
 
585 aa  315  1.9999999999999998e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  60.07 
 
 
394 aa  315  1.9999999999999998e-84  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  62.94 
 
 
557 aa  315  1.9999999999999998e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  60.62 
 
 
515 aa  314  2.9999999999999996e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  61.17 
 
 
585 aa  314  3.9999999999999997e-84  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
591 aa  314  4.999999999999999e-84  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_007974  Rmet_5250  methyl-accepting chemotaxis protein, sensory transducer  67.97 
 
 
677 aa  314  4.999999999999999e-84  Cupriavidus metallidurans CH34  Bacteria  normal  0.0837898  normal  0.0130353 
 
 
-
 
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