Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2100 |
Symbol | |
ID | 7088393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2489764 |
End bp | 2491761 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643461003 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_002358027 |
Protein GI | 217973276 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.328344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCT TCAAATTTTT TGGCAATGAT GAAGCGCGTG AGCAAAGGGA TGAAGAGCGT CAGCGCTATT TTCAGCTACT CGATAACAGT GGCAACAGCT TCATGATTGC TGACAGTCAG CGCAATATCA TCTATGCGAA TAAAGCCGTC GTCCGTTTGC TGCAAGAGGC CGAGGACGAT ATTCGTAAAG AGTTACCCCA ATTCTCGGTC GCAAAACTGA TCGGCAGTAA TATCGATATT TTCCATAAAA ATCCAGCGCA TCAACGCAAT CTTTTAGAGC GTTTAACTCA GTCCCATACT GCACAAATCA CCATTGGCAA ACGTACCTTT AGGTTGATTC TGACGCCGAT TATCACATCT GAAAATAAAC ACTTAGGTAC AGGTGTTGAG TGGATAGATC GCACCGAAAG TATCGAAGCC GAGCGCGCAA CCCAGCGTAT TATGGAAGCG CTCAACAATA CCAGTACCAA CGTCATGATC GCCGATGCTA ACCGTACCAT CATTTATATG AATCGCTCGG TCGAAGCCAT GTTACGTCAG TCTGAGCATG AAATTAGGCA GGCTTTACCG CATTTTTCCG TGGATAAAAT CCTCGGCAGC TCGATGGATA TCTTTCACCG CAATCCTGCC CACCAAGCGA GTTTACTCGA TAAATTAGAC CGTAAATATG AATCGCTGAT TAAGGTGGCC AGCTGCCATT TCCGTTTAAC GGCTAGCCCC ATAGTGTCTA AAGAAGGCGA GCGTTTAGGG ACAGTGGTTG AATGGCTCGA CCGCACCATT GAAGTGCAAA CTGAGCAGGA GATTTCCCGC ATTGTGACCG CAGCAGCAGC GGGTGATTTC TCCCAAAGGG CGGACACCGA AGGCAAGCAA GGTTTCTTCC TGATGTTGGC GAACAACTTG AATTCGTTAA TTGAAACCTC AGACCGTGGA CTACAAGATG TGGCGCGCGT ACTGATGGCA CTGGCGGATG GCGATCTCAC CACCCGCATT TATAACGACT ATGAAGGCAC GTTTAATGAT TTGAAAAACT ACTCAAATCA AACCGCTGAA AAGCTATCTT TTATGATCCA AGATATTCAG CGAGCGGCGG ATACCATTAA TACCGCCTCA GCAGAAATTG CCCAAGGCAA CGCCGATTTA TCCAGCCGCA CCGAAGAACA AGCTTCGAGC CTAGAAGAAA CCTCCGCCAG CATGGAGGAA CTCACAGGTA CAGTGAAACT CAATGCGGAT AACGCCAGCC AAGCCAATGC CTTAGCCTCT AAAGCTTCGG AAGTGGCGGT GGACGGTGGT GAGCTTATCC AGCAAGTGGT TCAGACCATG GCATCGATTA ATGAATCGGC GCGTAAGATT GCCGACATCA TTGGTGTTAT CGATGGTATT GCATTCCAAA CCAATATCTT AGCGCTTAAT GCCGCTGTTG AAGCCGCGCG GGCGGGTGAG CAAGGGCGTG GCTTTGCTGT AGTCGCATCA GAAGTGCGCA GCTTAGCCCA ACGCTCGGCC AATGCCGCTA AAGATATCAA GGCATTGATC TCGGATTCCG TGTCTAAAAT CGAGAGTGGC AACAGCCTTG TCGGTAAGTC CGGCGATACC ATGAAGGAAA TCGTCATCGC CATTAAACGG GTGAACGACA TCATGGCGGA AATCGCCTCA GCGTCTAATG AGCAGGCAAT CGGTATTGAT GAGATCAGCA AAGCCGTGGT GCAAATGGAT GAAATGACAC AGCAAAATGC GGCCTTGGTT GAAGAAGCGG CCGCCGCAGC TGAAAGCATG CAATCCCAAG CACAGCAACT TTCAGACAGT GTTGCCAGTT TTCGTGTAGA CGATGAGGAT GAAGCCCCAA GACACAGCAA CGCGCGATTA GCAGCGCCCA AAGCTAAGGC GATAAAACCC ATCAAACAGC AGCTTCAACC TATGGCAAAA TCAAGGGTGA CAGAGAAACC TAAAACCAAT GCTATGAAGC CCATGAAGCA AGATCAAGAT GAATGGGAAG AATTTTAA
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Protein sequence | MSIFKFFGND EAREQRDEER QRYFQLLDNS GNSFMIADSQ RNIIYANKAV VRLLQEAEDD IRKELPQFSV AKLIGSNIDI FHKNPAHQRN LLERLTQSHT AQITIGKRTF RLILTPIITS ENKHLGTGVE WIDRTESIEA ERATQRIMEA LNNTSTNVMI ADANRTIIYM NRSVEAMLRQ SEHEIRQALP HFSVDKILGS SMDIFHRNPA HQASLLDKLD RKYESLIKVA SCHFRLTASP IVSKEGERLG TVVEWLDRTI EVQTEQEISR IVTAAAAGDF SQRADTEGKQ GFFLMLANNL NSLIETSDRG LQDVARVLMA LADGDLTTRI YNDYEGTFND LKNYSNQTAE KLSFMIQDIQ RAADTINTAS AEIAQGNADL SSRTEEQASS LEETSASMEE LTGTVKLNAD NASQANALAS KASEVAVDGG ELIQQVVQTM ASINESARKI ADIIGVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAS EVRSLAQRSA NAAKDIKALI SDSVSKIESG NSLVGKSGDT MKEIVIAIKR VNDIMAEIAS ASNEQAIGID EISKAVVQMD EMTQQNAALV EEAAAAAESM QSQAQQLSDS VASFRVDDED EAPRHSNARL AAPKAKAIKP IKQQLQPMAK SRVTEKPKTN AMKPMKQDQD EWEEF
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