More than 300 homologs were found in PanDaTox collection
for query gene PXO_00046 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_00041  chemotaxis protein  69.54 
 
 
752 aa  999    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  64.59 
 
 
755 aa  676    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  66.71 
 
 
733 aa  941    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  64.53 
 
 
705 aa  685    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  57.66 
 
 
691 aa  709    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  52.11 
 
 
740 aa  656    Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  100 
 
 
753 aa  1512    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  64.38 
 
 
843 aa  604  1.0000000000000001e-171  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  49.36 
 
 
745 aa  592  1e-167  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  65.29 
 
 
706 aa  583  1.0000000000000001e-165  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  47.79 
 
 
707 aa  525  1e-148  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  51.15 
 
 
797 aa  485  1e-135  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  67.8 
 
 
775 aa  462  1e-129  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  74.85 
 
 
793 aa  458  1e-127  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  39.07 
 
 
792 aa  429  1e-119  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  54.48 
 
 
656 aa  369  1e-100  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  54.48 
 
 
656 aa  369  1e-100  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  57.79 
 
 
679 aa  367  1e-100  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  54.11 
 
 
654 aa  365  1e-99  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  53.62 
 
 
664 aa  365  1e-99  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  54.46 
 
 
657 aa  364  3e-99  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  59.73 
 
 
945 aa  364  4e-99  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  53.12 
 
 
664 aa  363  9e-99  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.99 
 
 
665 aa  362  2e-98  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  63.24 
 
 
679 aa  361  3e-98  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  61.78 
 
 
572 aa  355  2e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  61.6 
 
 
559 aa  353  4e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  51.5 
 
 
767 aa  354  4e-96  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
657 aa  354  4e-96  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  64.47 
 
 
559 aa  347  6e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.08 
 
 
845 aa  341  4e-92  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  65.03 
 
 
586 aa  339  9.999999999999999e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  61.45 
 
 
559 aa  338  1.9999999999999998e-91  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  58.81 
 
 
592 aa  336  7.999999999999999e-91  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.78 
 
 
701 aa  335  2e-90  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  59.37 
 
 
583 aa  333  6e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  55.62 
 
 
578 aa  333  6e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  52.26 
 
 
860 aa  333  7.000000000000001e-90  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  59.26 
 
 
542 aa  333  1e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  53.59 
 
 
579 aa  330  5.0000000000000004e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  54.91 
 
 
793 aa  330  5.0000000000000004e-89  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  51.99 
 
 
557 aa  330  7e-89  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  51.99 
 
 
557 aa  330  7e-89  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  53.24 
 
 
579 aa  329  1.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  51.99 
 
 
557 aa  329  1.0000000000000001e-88  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  60.86 
 
 
552 aa  328  2.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  52.38 
 
 
589 aa  328  2.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  56.57 
 
 
570 aa  328  2.0000000000000001e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  57.89 
 
 
580 aa  328  2.0000000000000001e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  51.26 
 
 
863 aa  328  2.0000000000000001e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  53.44 
 
 
584 aa  328  3e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  57.43 
 
 
779 aa  328  3e-88  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  63.61 
 
 
579 aa  328  3e-88  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  63.79 
 
 
569 aa  328  3e-88  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.54 
 
 
1123 aa  328  3e-88  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  54.78 
 
 
562 aa  327  5e-88  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  62.5 
 
 
394 aa  325  2e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  62.12 
 
 
598 aa  325  2e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  55.8 
 
 
575 aa  324  3e-87  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  53.76 
 
 
566 aa  322  9.999999999999999e-87  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  61.43 
 
 
596 aa  322  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.1 
 
 
864 aa  322  1.9999999999999998e-86  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  57.88 
 
 
567 aa  321  3e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  64.86 
 
 
680 aa  321  3.9999999999999996e-86  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  60.2 
 
 
578 aa  320  3.9999999999999996e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.61 
 
 
609 aa  320  3.9999999999999996e-86  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  59.8 
 
 
580 aa  320  3.9999999999999996e-86  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  58.96 
 
 
650 aa  320  5e-86  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  56.46 
 
 
581 aa  320  5e-86  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  56.08 
 
 
527 aa  320  7e-86  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.26 
 
 
608 aa  320  7.999999999999999e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.79 
 
 
566 aa  320  7.999999999999999e-86  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  60.67 
 
 
577 aa  320  9e-86  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  64.91 
 
 
617 aa  319  1e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  57.75 
 
 
621 aa  319  1e-85  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  59.09 
 
 
584 aa  319  1e-85  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  56.05 
 
 
586 aa  318  3e-85  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  66.8 
 
 
515 aa  317  4e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  57.59 
 
 
575 aa  317  4e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  60.96 
 
 
591 aa  317  4e-85  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  60.54 
 
 
585 aa  317  7e-85  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  60.34 
 
 
537 aa  317  7e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  62.46 
 
 
513 aa  317  7e-85  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
584 aa  317  7e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  45.48 
 
 
678 aa  316  8e-85  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  52.66 
 
 
652 aa  315  9.999999999999999e-85  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.12 
 
 
584 aa  315  1.9999999999999998e-84  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  62.68 
 
 
601 aa  315  1.9999999999999998e-84  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0231  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
324 aa  315  1.9999999999999998e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  61.46 
 
 
585 aa  315  1.9999999999999998e-84  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  52.97 
 
 
552 aa  315  1.9999999999999998e-84  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  50.67 
 
 
562 aa  315  2.9999999999999996e-84  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  58.22 
 
 
630 aa  315  2.9999999999999996e-84  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  62.24 
 
 
557 aa  314  2.9999999999999996e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
433 aa  314  3.9999999999999997e-84  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  60.67 
 
 
525 aa  314  3.9999999999999997e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  59.14 
 
 
618 aa  313  4.999999999999999e-84  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  63.88 
 
 
573 aa  313  5.999999999999999e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.95 
 
 
618 aa  313  6.999999999999999e-84  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  56.11 
 
 
594 aa  313  6.999999999999999e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
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