| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2216 |
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| Symbol | |
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| ID | 4478612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2662258 |
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| End bp | 2664231 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726811 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_869851 |
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| Protein GI | 117920659 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTT TCAATGTGTT TGGAAATGAA GAGGCGCGCC AGCAAAAGGA AGAAGAGCTG
CAACGCTATT TCCAATTATT AGATAACAGC GGCAACAGCT TTATGATCGC CGACAGCAAC
CGCAATATTA TCTACGCCAA TAAAGCGGTA TTGAATATGT TATCCGAGGC CGAGGCGGAT
ATTCGCAAAG AGCTGCCGCA GTTCTCTGTG GCCAAGGTGG TGGGCAGTAA TATCGATATT
TTCCATAAAA ATCCGGCTCA TCAACGCAAT ATGCTCGAGC GCCTTACCCA ATCCCATACG
GCGCAAATCA CCATAGGTAA ACGGACTTTT AAGCTGATCC TCACACCCAT TATCACACGT
GAAAATAAGC ACTTAGGCAC GGGCGTTGAA TGGATTGATA GAACAGAGAG CATAGAGTCC
GAGCGGGCGA CGCAGCGCAT TTTAGAGGCG CTGAATAATA CTAGTACCAA TGTGATGATC
GCCGATGCCA ACCGCACCAT TATCTATATG AACCGCTCGG TGGAATCGAT GCTGCGCCAA
TCTGAGAGTG AGATAAGACA AGCGCTGCCG CATTTCTCCG TGGATAAAAT TCTTGGCAGC
TCGATGGATA TTTTCCATAA GAATCCAGCC CATCAAGCCA GTCTGTTAGA CAAGCTCGAT
CGTAAATATG AATCGCAGAT CAAAGTGGCC AGTTGTCACT TCCGCTTAAC CGCAAGCCCG
ATTATTTCTA AAACGGGTGA GCGGTTAGGC TCTGTCGTCG AATGGCTGGA CCGTACGGTC
GAAGTGCAAA TCGAGCAAGA AATCTCGCGC ATCGTCAATG CGGCTGCGGC GGGGGATTTC
TCCCAACGGG CCGAGACGCA AGGTAAGCAG GGCTTCTTCT TGATGCTCGC CAATAGCCTC
AATGCCTTGA TTGAAACCTC GGATCGCGGT TTGCAGGATG TGGCGCGGGT GTTGATGGCG
CTCGCCGAAG GTGATTTAAC CACGCGTATC TATAACGATT ACGAAGGCAC CTTTAATGAT
TTGAAAAACT ATTCAAATCA AACGGCTGAA AAGCTCTCTT ACATGATAAG AGACATTCAA
AAAGCCGCCG ATACCATCAA TACCGCCTCT TCTGAAATCG CCCAGGGCAA TGCCGATTTA
TCGAGTCGTA CCGAGGAGCA AGCATCGAGT CTTGAACAAA CCTCAGCGAG TATGGAAGAG
CTGACGGGCA CAGTGAAGTT AAATGCCGAT AACGCCAGTC AAGCCAATGC ACTTGCCTCT
AAGGCCGCCG ACGTTGCCGT CGATGGGGGC GAGCTTATCC AGCAAGTGGT GCAAACCATG
GCATCGATTA ACGAATCGGC ACGTAAGATC GCCGATATTA TTGGGGTTAT CGATGGCATT
GCCTTCCAAA CCAATATCTT AGCGCTTAAT GCCGCGGTCG AAGCGGCCAG AGCCGGCGAG
CAAGGCCGTG GATTTGCGGT GGTGGCCTCA GAGGTGAGAA GCCTGGCACA ACGTTCGGCC
AACGCGGCCA AGGACATTAA GGCCTTGATC TCAGACTCTG TGACCAAAAT CGAGAGTGGC
AACAGTTTAG TCGGCAAATC CGGCGATACT ATGAAAGAAA TCGTCATCGC CATTAAACGG
GTGAACGATA TTATGGCCGA AATTGCCTCG GCCTCGAATG AGCAGGCCAT CGGCATCGAT
GAGATCAGCA AAGCCGTAGT ACAAATGGAT GAAATGACGC AGCAAAACGC GGCCTTAGTG
GAAGAAGCCG CCGCCGCAGC CGAAAGCATG CAGTCACAGG CGCAGCAGTT AGCCGACAGT
GTGGCGAACT TTACCGTGGA TGAAGACACC AGCGCTGCGC CCAAATCCGT GGCGAGCACC
AAAAAGTTAG CGGTTAAGCA ACCGCCATCG ACAGTGACTC GCATGCCCGT GAAACCTAAG
GCGATGGCGC CAAAGGTCAA TAAAGCCGAC CAAGACGAAT GGGAAGATTT TTGA
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| Protein sequence | MGIFNVFGNE EARQQKEEEL QRYFQLLDNS GNSFMIADSN RNIIYANKAV LNMLSEAEAD
IRKELPQFSV AKVVGSNIDI FHKNPAHQRN MLERLTQSHT AQITIGKRTF KLILTPIITR
ENKHLGTGVE WIDRTESIES ERATQRILEA LNNTSTNVMI ADANRTIIYM NRSVESMLRQ
SESEIRQALP HFSVDKILGS SMDIFHKNPA HQASLLDKLD RKYESQIKVA SCHFRLTASP
IISKTGERLG SVVEWLDRTV EVQIEQEISR IVNAAAAGDF SQRAETQGKQ GFFLMLANSL
NALIETSDRG LQDVARVLMA LAEGDLTTRI YNDYEGTFND LKNYSNQTAE KLSYMIRDIQ
KAADTINTAS SEIAQGNADL SSRTEEQASS LEQTSASMEE LTGTVKLNAD NASQANALAS
KAADVAVDGG ELIQQVVQTM ASINESARKI ADIIGVIDGI AFQTNILALN AAVEAARAGE
QGRGFAVVAS EVRSLAQRSA NAAKDIKALI SDSVTKIESG NSLVGKSGDT MKEIVIAIKR
VNDIMAEIAS ASNEQAIGID EISKAVVQMD EMTQQNAALV EEAAAAAESM QSQAQQLADS
VANFTVDEDT SAAPKSVAST KKLAVKQPPS TVTRMPVKPK AMAPKVNKAD QDEWEDF
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