More than 300 homologs were found in PanDaTox collection
for query gene Daro_0729 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  59.4 
 
 
792 aa  677    Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  100 
 
 
945 aa  1921    Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  64.06 
 
 
679 aa  583  1.0000000000000001e-165  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  63.8 
 
 
679 aa  575  1.0000000000000001e-162  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  55.11 
 
 
767 aa  544  1e-153  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  56.84 
 
 
664 aa  527  1e-148  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  56.92 
 
 
665 aa  526  1e-148  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  56.84 
 
 
664 aa  525  1e-147  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  56.81 
 
 
657 aa  524  1e-147  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  55.81 
 
 
657 aa  521  1e-146  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  57.98 
 
 
654 aa  521  1e-146  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.55 
 
 
1123 aa  522  1e-146  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  56.61 
 
 
656 aa  521  1e-146  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  53.52 
 
 
860 aa  522  1e-146  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  56.48 
 
 
863 aa  517  1.0000000000000001e-145  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  56.42 
 
 
656 aa  519  1.0000000000000001e-145  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  43.3 
 
 
797 aa  519  1.0000000000000001e-145  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
793 aa  503  1e-141  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.02 
 
 
864 aa  499  1e-140  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  47.53 
 
 
775 aa  479  1e-133  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  50.09 
 
 
779 aa  457  1e-127  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  45.03 
 
 
793 aa  458  1e-127  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  51.3 
 
 
1029 aa  442  9.999999999999999e-123  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  46.03 
 
 
678 aa  430  1e-119  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.97 
 
 
701 aa  411  1e-113  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  58.79 
 
 
755 aa  409  1.0000000000000001e-112  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  62.29 
 
 
733 aa  406  1e-111  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  64.14 
 
 
740 aa  400  9.999999999999999e-111  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  55.91 
 
 
752 aa  401  9.999999999999999e-111  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  59.73 
 
 
753 aa  393  1e-108  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  44.39 
 
 
705 aa  394  1e-108  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.07 
 
 
888 aa  386  1e-106  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  59.24 
 
 
745 aa  382  1e-104  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  44.46 
 
 
843 aa  373  1e-101  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  61.56 
 
 
572 aa  372  1e-101  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  45.55 
 
 
610 aa  372  1e-101  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  45.88 
 
 
706 aa  368  1e-100  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  63.14 
 
 
559 aa  363  6e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  41.58 
 
 
691 aa  363  8e-99  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  64.6 
 
 
586 aa  362  2e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  61.41 
 
 
559 aa  355  2e-96  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  63.34 
 
 
583 aa  355  2e-96  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  68.55 
 
 
592 aa  355  2.9999999999999997e-96  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.49 
 
 
890 aa  354  4e-96  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.3 
 
 
598 aa  353  7e-96  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  63.13 
 
 
559 aa  353  8.999999999999999e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  64.85 
 
 
579 aa  352  2e-95  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.94 
 
 
845 aa  351  3e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  59.89 
 
 
569 aa  350  8e-95  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  63.04 
 
 
542 aa  348  4e-94  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  59.18 
 
 
585 aa  347  5e-94  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  61.68 
 
 
578 aa  345  2e-93  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  66.13 
 
 
680 aa  343  5.999999999999999e-93  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  66.77 
 
 
577 aa  342  1e-92  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  56.66 
 
 
578 aa  342  1e-92  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  67.91 
 
 
433 aa  342  2e-92  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  63.55 
 
 
580 aa  342  2e-92  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  61.46 
 
 
584 aa  341  4e-92  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  59.4 
 
 
579 aa  338  1.9999999999999998e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  59.55 
 
 
587 aa  338  2.9999999999999997e-91  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  55.43 
 
 
549 aa  337  5.999999999999999e-91  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  63.91 
 
 
394 aa  337  7e-91  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  63.18 
 
 
552 aa  337  9e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  57.23 
 
 
557 aa  336  1e-90  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  57.23 
 
 
557 aa  336  1e-90  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  58.93 
 
 
589 aa  336  2e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.22 
 
 
566 aa  335  2e-90  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  61.8 
 
 
596 aa  335  2e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  57.23 
 
 
557 aa  335  3e-90  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  58.38 
 
 
562 aa  335  3e-90  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  62 
 
 
527 aa  334  4e-90  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  59.87 
 
 
579 aa  334  5e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  61.29 
 
 
659 aa  334  5e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3286  methyl-accepting chemotaxis sensory transducer  56.76 
 
 
499 aa  333  8e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.729026  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  61.95 
 
 
515 aa  333  1e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  63.07 
 
 
653 aa  332  2e-89  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  63.07 
 
 
653 aa  332  2e-89  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  68.09 
 
 
615 aa  331  3e-89  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  68.09 
 
 
615 aa  331  3e-89  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
557 aa  331  3e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  61.94 
 
 
525 aa  331  4e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  63.85 
 
 
598 aa  330  5.0000000000000004e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  59.32 
 
 
650 aa  330  6e-89  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  63.16 
 
 
550 aa  330  7e-89  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  62.5 
 
 
586 aa  330  8e-89  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  56.89 
 
 
554 aa  330  8e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007947  Mfla_1934  methyl-accepting chemotaxis sensory transducer  69.15 
 
 
560 aa  330  9e-89  Methylobacillus flagellatus KT  Bacteria  normal  0.718562  normal 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  67.54 
 
 
524 aa  328  2.0000000000000001e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  62.3 
 
 
584 aa  329  2.0000000000000001e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  56.85 
 
 
589 aa  328  3e-88  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  56.36 
 
 
552 aa  328  3e-88  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  54.34 
 
 
556 aa  327  5e-88  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  61.54 
 
 
585 aa  327  5e-88  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
553 aa  327  5e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
584 aa  327  6e-88  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
661 aa  327  6e-88  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  61.81 
 
 
554 aa  327  6e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.07 
 
 
608 aa  327  8.000000000000001e-88  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  61.89 
 
 
557 aa  326  1e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.07 
 
 
609 aa  326  1e-87  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
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