More than 300 homologs were found in PanDaTox collection
for query gene Tcr_0553 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
888 aa  1830    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  36.86 
 
 
767 aa  421  1e-116  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  46.72 
 
 
860 aa  416  1e-114  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  44.33 
 
 
863 aa  390  1e-107  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.32 
 
 
1123 aa  386  1e-105  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.43 
 
 
864 aa  382  1e-104  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  37.81 
 
 
945 aa  363  9e-99  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  42 
 
 
679 aa  360  5e-98  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  38.07 
 
 
792 aa  357  3.9999999999999996e-97  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
657 aa  357  5.999999999999999e-97  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  41.53 
 
 
679 aa  357  6.999999999999999e-97  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
656 aa  356  1e-96  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
656 aa  355  2.9999999999999997e-96  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  40.73 
 
 
654 aa  353  7e-96  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
657 aa  353  8.999999999999999e-96  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  40.3 
 
 
664 aa  350  6e-95  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  40.3 
 
 
664 aa  350  7e-95  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.3 
 
 
665 aa  350  9e-95  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
793 aa  346  8.999999999999999e-94  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  41.3 
 
 
1029 aa  342  1e-92  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  36.54 
 
 
797 aa  337  5.999999999999999e-91  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.32 
 
 
1170 aa  325  2e-87  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  34.26 
 
 
678 aa  323  6e-87  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.61 
 
 
701 aa  311  2.9999999999999997e-83  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  35.09 
 
 
775 aa  303  9e-81  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  36.46 
 
 
793 aa  302  2e-80  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0077  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
941 aa  298  2e-79  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000232315  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  35.87 
 
 
779 aa  295  2e-78  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.2 
 
 
890 aa  283  7.000000000000001e-75  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  34.25 
 
 
733 aa  281  3e-74  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
815 aa  280  6e-74  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
610 aa  279  1e-73  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  40.82 
 
 
753 aa  269  2e-70  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
755 aa  259  1e-67  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
678 aa  256  1.0000000000000001e-66  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  40.05 
 
 
752 aa  256  1.0000000000000001e-66  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
740 aa  256  2.0000000000000002e-66  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
745 aa  253  8.000000000000001e-66  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  38.72 
 
 
843 aa  253  1e-65  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.18 
 
 
845 aa  253  2e-65  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
712 aa  249  2e-64  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.04 
 
 
1019 aa  246  9.999999999999999e-64  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  43.93 
 
 
557 aa  246  1.9999999999999999e-63  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  43.93 
 
 
557 aa  246  1.9999999999999999e-63  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  44.88 
 
 
578 aa  245  3e-63  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  43.93 
 
 
557 aa  245  3e-63  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  41.69 
 
 
705 aa  244  3.9999999999999997e-63  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  43.46 
 
 
535 aa  244  3.9999999999999997e-63  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0793  methyl-accepting chemotaxis protein  38.44 
 
 
740 aa  244  7e-63  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.14 
 
 
954 aa  242  2e-62  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  47.02 
 
 
605 aa  241  5e-62  Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  43.61 
 
 
532 aa  241  5e-62  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3471  putative methyl-accepting chemotaxis protein  47.02 
 
 
605 aa  241  5.999999999999999e-62  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3975  methyl-accepting chemotaxis protein  47.02 
 
 
601 aa  240  6.999999999999999e-62  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3894  methyl-accepting chemotaxis protein  47.02 
 
 
601 aa  240  6.999999999999999e-62  Burkholderia pseudomallei 668  Bacteria  normal  0.0518753  n/a   
 
 
-
 
NC_007434  BURPS1710b_0112  putative methyl-accepting chemotaxis protein  47.02 
 
 
605 aa  240  8e-62  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
706 aa  240  8e-62  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  44.75 
 
 
580 aa  240  8e-62  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  41.77 
 
 
559 aa  240  9e-62  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  44.59 
 
 
622 aa  240  9e-62  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  31.91 
 
 
622 aa  239  2e-61  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
566 aa  239  2e-61  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
661 aa  239  2e-61  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  46.71 
 
 
557 aa  238  3e-61  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
657 aa  238  3e-61  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
527 aa  238  4e-61  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_012912  Dd1591_0769  methyl-accepting chemotaxis sensory transducer  44.18 
 
 
505 aa  238  5.0000000000000005e-61  Dickeya zeae Ech1591  Bacteria  normal  0.0409416  n/a   
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  46.67 
 
 
601 aa  238  5.0000000000000005e-61  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1449  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
647 aa  237  8e-61  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
542 aa  235  2.0000000000000002e-60  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2435  methyl-accepting chemotaxis sensory transducer  43.19 
 
 
507 aa  236  2.0000000000000002e-60  Caulobacter sp. K31  Bacteria  normal  0.264745  normal  0.414024 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
567 aa  235  3e-60  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  41.47 
 
 
583 aa  234  4.0000000000000004e-60  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
547 aa  234  5e-60  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  43.3 
 
 
552 aa  234  6e-60  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  43.77 
 
 
584 aa  234  6e-60  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  43.79 
 
 
628 aa  234  7.000000000000001e-60  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
628 aa  234  7.000000000000001e-60  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
547 aa  234  7.000000000000001e-60  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  45.04 
 
 
691 aa  234  7.000000000000001e-60  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
598 aa  234  8.000000000000001e-60  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
547 aa  233  9e-60  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  43.45 
 
 
630 aa  233  9e-60  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
547 aa  232  2e-59  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  43.55 
 
 
557 aa  233  2e-59  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
547 aa  233  2e-59  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
589 aa  231  3e-59  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  42.28 
 
 
796 aa  231  3e-59  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.66 
 
 
853 aa  231  4e-59  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  43.06 
 
 
649 aa  231  5e-59  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  43.45 
 
 
586 aa  231  5e-59  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  43.06 
 
 
649 aa  231  5e-59  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_010159  YpAngola_A3774  methyl-accepting chemotaxis protein  43.06 
 
 
649 aa  231  5e-59  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  44.14 
 
 
554 aa  231  6e-59  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6463  methyl-accepting chemotaxis sensory transducer  43.79 
 
 
654 aa  231  6e-59  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  40.59 
 
 
553 aa  231  6e-59  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
562 aa  230  7e-59  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
508 aa  231  7e-59  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
520 aa  230  8e-59  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
532 aa  230  9e-59  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
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