Gene PC1_4161 details

Gene Information

• Locus tag: PC1_4161
• ID: 8135159
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4695425
• End bp: 4697311
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644867478
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003019711
• Protein GI: 253690521
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTTG ACAATCTAAA AGTCGGTAAA AAATTAGGAT TAGGCTTTTT CCTGATTCTG 
CTGATGACCA TGGTGATTGC CGGTGCGGGC ATTATGCATA TTAGCTCGCT GAAAGACAGT 
ATTGATAAAG TTAATTTAAG CAACAATATC AATGATGAAA TTAACCAGGC TAAATATTAC 
CGCGCATTAT ACGGCACCAC TTATAACCCA GATGATATAA AAAGGAACAT TGAGCATATT 
GCCAGCGTCA GTAAACTCGC TGAAAAAGCA AAAGAATTTC ACTGGCCTGA AAGCGACGCC 
AAGAAAATAG CCAGCATCCC CACATTAATT ACCAGCTATC AGGAAAAACA AAATAATTAT 
ATTAATGCCG TGAGCAAAAA GGATGCCGTA AGAAAAAGCT GGAATATTTC AACCACGGAA 
AAACCCCTAC AAGATCTCAA CGATCAATTA AAGACAGACA ACAACAGCAC GAACCTGCAA 
TTATTACTTT CCGACCTGAA CCAAAAACTG ATTGCCGTCC GCTACCACGT TCGTGGTTTA 
TTACTTTCTA CCAATAAAGA ATCCGAAGAA AAACTGACGG ATGCCATCAA CGCGGCACAA 
ACGTCATTGA CCTTCCTGTA TCAGAGTCTG TCTGCCGAAC AGCGTGAAAC GCTGGCACCG 
GTTATGACGA TCATGAACAA CTATGAAGAG CAGGTTCTGG CCTATATGCC AGCCTATCAG 
GAGGAAATGG CGCAGGCGGG GCAAATGCAG GCTGTCGCCG AACAGCTGAA CATCGTGGTG 
AAATCCCTGC TTAGCGATCA GTTGGCGGCG TCACAGGCTG ATATTCACAA TGCCACGCTG 
CAAATGAGCA TCGCGGCGCT GATTACGCTG CTGCTTGGTC TGCTGATTTC CTGGTTCATT 
TCACGCCAGA TCACCACACC GTTGGGCAAC ACATTGAACA TGGCTGAAAA AATCGCGACA 
GGCGACCTCA CCATGTCCAT CAACACGACG CGTAAGGATG AGCTGGGTCA GTTGATGAGT 
GCGATGTCGA AAATGAACGA CAACCTGCAC AATATGATCG ACGACATTCG CGTCGGCGTC 
AGCCAGATTT CTAATGCTTC CAGCGAGATC GTCGCAGGCA ATACAGACCT GTCATCACGC 
ACCGAGCAAC AGGCTGCAGC CGTTGAACAA ACCGCCGCCA GCATGGAGCA GCTCACCGCG 
ACAGTTAAGC AAAACGCGGA TAACGCACAC CACGCCAACA AATTGGCAAT CAGCGCTTCC 
CAAACGGCCA AACAGGGTGG CGAGCAGGTG AATAACGTGG TGCAAACCAT GACCGCGATT 
GAGAACAGCT CTAAACGTAT CGCGGAAATC ACGTCCGTCA TTAACAGCAT CGCCTTCCAG 
ACCAACATTC TGGCATTGAA CGCCGCGGTG GAAGCCGCTC GCGCCGGTGA ACAGGGCCGT 
GGCTTTGCCG TGGTTGCCAG CGAAGTCCGC AATCTGGCAC AGCGCAGTTC TCAAGCCGCG 
AAGGAAATCG AAGGCTTGAT CTCTGAATCA GTTAATCAGG TATCGCACGG TGCGACGCTG 
GTCGGCAACG CTGGAAAAAC GATGAACGAT ATCGTCACCT CGATCACACA GGTGCATGAC 
ATCATGGGTG AAATTGCCAC CGCATCGGAT GAGCAAAGCC GGGGTATCAG TCAGGTTAGC 
CAGGCGATTG TGGAGATGGA CAGCACCACG CAGCAGAACG CCGCGCTGGT TGAACAATCC 
TCTGCTGCCG CCGACTCGCT GGAAGAACAG GCACGGTTGC TGAAGCAGGC GGTTTCCGTC 
TTCCGTCTGG CCAACACGCA GCACGATGAG ACGCCTGCCA GTATCGCATT TACCAACCCA 
ACGCATCGTC TGCACGCACC GCGCTAA 

 

Protein sequence

MNFDNLKVGK KLGLGFFLIL LMTMVIAGAG IMHISSLKDS IDKVNLSNNI NDEINQAKYY 
RALYGTTYNP DDIKRNIEHI ASVSKLAEKA KEFHWPESDA KKIASIPTLI TSYQEKQNNY 
INAVSKKDAV RKSWNISTTE KPLQDLNDQL KTDNNSTNLQ LLLSDLNQKL IAVRYHVRGL 
LLSTNKESEE KLTDAINAAQ TSLTFLYQSL SAEQRETLAP VMTIMNNYEE QVLAYMPAYQ 
EEMAQAGQMQ AVAEQLNIVV KSLLSDQLAA SQADIHNATL QMSIAALITL LLGLLISWFI 
SRQITTPLGN TLNMAEKIAT GDLTMSINTT RKDELGQLMS AMSKMNDNLH NMIDDIRVGV 
SQISNASSEI VAGNTDLSSR TEQQAAAVEQ TAASMEQLTA TVKQNADNAH HANKLAISAS 
QTAKQGGEQV NNVVQTMTAI ENSSKRIAEI TSVINSIAFQ TNILALNAAV EAARAGEQGR 
GFAVVASEVR NLAQRSSQAA KEIEGLISES VNQVSHGATL VGNAGKTMND IVTSITQVHD 
IMGEIATASD EQSRGISQVS QAIVEMDSTT QQNAALVEQS SAAADSLEEQ ARLLKQAVSV 
FRLANTQHDE TPASIAFTNP THRLHAPR