Gene PC1_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4161 
Symbol 
ID8135159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4695425 
End bp4697311 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content50% 
IMG OID644867478 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003019711 
Protein GI253690521 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTG ACAATCTAAA AGTCGGTAAA AAATTAGGAT TAGGCTTTTT CCTGATTCTG 
CTGATGACCA TGGTGATTGC CGGTGCGGGC ATTATGCATA TTAGCTCGCT GAAAGACAGT
ATTGATAAAG TTAATTTAAG CAACAATATC AATGATGAAA TTAACCAGGC TAAATATTAC
CGCGCATTAT ACGGCACCAC TTATAACCCA GATGATATAA AAAGGAACAT TGAGCATATT
GCCAGCGTCA GTAAACTCGC TGAAAAAGCA AAAGAATTTC ACTGGCCTGA AAGCGACGCC
AAGAAAATAG CCAGCATCCC CACATTAATT ACCAGCTATC AGGAAAAACA AAATAATTAT
ATTAATGCCG TGAGCAAAAA GGATGCCGTA AGAAAAAGCT GGAATATTTC AACCACGGAA
AAACCCCTAC AAGATCTCAA CGATCAATTA AAGACAGACA ACAACAGCAC GAACCTGCAA
TTATTACTTT CCGACCTGAA CCAAAAACTG ATTGCCGTCC GCTACCACGT TCGTGGTTTA
TTACTTTCTA CCAATAAAGA ATCCGAAGAA AAACTGACGG ATGCCATCAA CGCGGCACAA
ACGTCATTGA CCTTCCTGTA TCAGAGTCTG TCTGCCGAAC AGCGTGAAAC GCTGGCACCG
GTTATGACGA TCATGAACAA CTATGAAGAG CAGGTTCTGG CCTATATGCC AGCCTATCAG
GAGGAAATGG CGCAGGCGGG GCAAATGCAG GCTGTCGCCG AACAGCTGAA CATCGTGGTG
AAATCCCTGC TTAGCGATCA GTTGGCGGCG TCACAGGCTG ATATTCACAA TGCCACGCTG
CAAATGAGCA TCGCGGCGCT GATTACGCTG CTGCTTGGTC TGCTGATTTC CTGGTTCATT
TCACGCCAGA TCACCACACC GTTGGGCAAC ACATTGAACA TGGCTGAAAA AATCGCGACA
GGCGACCTCA CCATGTCCAT CAACACGACG CGTAAGGATG AGCTGGGTCA GTTGATGAGT
GCGATGTCGA AAATGAACGA CAACCTGCAC AATATGATCG ACGACATTCG CGTCGGCGTC
AGCCAGATTT CTAATGCTTC CAGCGAGATC GTCGCAGGCA ATACAGACCT GTCATCACGC
ACCGAGCAAC AGGCTGCAGC CGTTGAACAA ACCGCCGCCA GCATGGAGCA GCTCACCGCG
ACAGTTAAGC AAAACGCGGA TAACGCACAC CACGCCAACA AATTGGCAAT CAGCGCTTCC
CAAACGGCCA AACAGGGTGG CGAGCAGGTG AATAACGTGG TGCAAACCAT GACCGCGATT
GAGAACAGCT CTAAACGTAT CGCGGAAATC ACGTCCGTCA TTAACAGCAT CGCCTTCCAG
ACCAACATTC TGGCATTGAA CGCCGCGGTG GAAGCCGCTC GCGCCGGTGA ACAGGGCCGT
GGCTTTGCCG TGGTTGCCAG CGAAGTCCGC AATCTGGCAC AGCGCAGTTC TCAAGCCGCG
AAGGAAATCG AAGGCTTGAT CTCTGAATCA GTTAATCAGG TATCGCACGG TGCGACGCTG
GTCGGCAACG CTGGAAAAAC GATGAACGAT ATCGTCACCT CGATCACACA GGTGCATGAC
ATCATGGGTG AAATTGCCAC CGCATCGGAT GAGCAAAGCC GGGGTATCAG TCAGGTTAGC
CAGGCGATTG TGGAGATGGA CAGCACCACG CAGCAGAACG CCGCGCTGGT TGAACAATCC
TCTGCTGCCG CCGACTCGCT GGAAGAACAG GCACGGTTGC TGAAGCAGGC GGTTTCCGTC
TTCCGTCTGG CCAACACGCA GCACGATGAG ACGCCTGCCA GTATCGCATT TACCAACCCA
ACGCATCGTC TGCACGCACC GCGCTAA
 
Protein sequence
MNFDNLKVGK KLGLGFFLIL LMTMVIAGAG IMHISSLKDS IDKVNLSNNI NDEINQAKYY 
RALYGTTYNP DDIKRNIEHI ASVSKLAEKA KEFHWPESDA KKIASIPTLI TSYQEKQNNY
INAVSKKDAV RKSWNISTTE KPLQDLNDQL KTDNNSTNLQ LLLSDLNQKL IAVRYHVRGL
LLSTNKESEE KLTDAINAAQ TSLTFLYQSL SAEQRETLAP VMTIMNNYEE QVLAYMPAYQ
EEMAQAGQMQ AVAEQLNIVV KSLLSDQLAA SQADIHNATL QMSIAALITL LLGLLISWFI
SRQITTPLGN TLNMAEKIAT GDLTMSINTT RKDELGQLMS AMSKMNDNLH NMIDDIRVGV
SQISNASSEI VAGNTDLSSR TEQQAAAVEQ TAASMEQLTA TVKQNADNAH HANKLAISAS
QTAKQGGEQV NNVVQTMTAI ENSSKRIAEI TSVINSIAFQ TNILALNAAV EAARAGEQGR
GFAVVASEVR NLAQRSSQAA KEIEGLISES VNQVSHGATL VGNAGKTMND IVTSITQVHD
IMGEIATASD EQSRGISQVS QAIVEMDSTT QQNAALVEQS SAAADSLEEQ ARLLKQAVSV
FRLANTQHDE TPASIAFTNP THRLHAPR