| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3975 |
|---|
| Symbol | |
|---|
| ID | 4902234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3876733 |
|---|
| End bp | 3878538 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640137201 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_001068195 |
|---|
| Protein GI | 126453360 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCCT CGATCCGGTC CCGCATTCTC GTCGCGTGCC TCGCCATCGT CATCGGCTCG
CTCGTCATCA ACACGGCGCT CAACTATTTC GTCGCCAACC GCTATAACCG CGAGTCCATC
AGCCAGAACC TCAGCGCGGT GCTGACCGGC CACGAAGCCG GCATCGCCGA TTGGGTCGCG
TCGAAGACGC AGATGATCGT GTCGGTCGAA GACGCCGCGA TCTCGCCGGA TCCGATTCCG
GCGCTCAAGC AGATCGCCGC CGCCGGCGGG TTCACCAATG TCTATGTCGG CTACGCGGAC
AAGACCGCGA AATTCTCCGA TCCCACCGGT ATTCCGCCCG ACTACGATCC GACCGGCCGC
CCGTGGTACA AGCAGGCCGC GCAGGCGGGC AAGCCGGTCG TCACGCCGCC CTATGTCGAC
GTCGGCACGG GCAAGCTCGT CGTCGCGTTC GCCGCGCCGA TCATGCGCGA CGGCGCGCTG
AAGGGCGTCG TGTCCGGCGA CGTCGCGATG GACAGCGTGA TCGCGAACGT CAAGGCGATC
CACCCGACGC CCGGCAGTTT CGGGATGCTC GTCGACCGCA GCGGCCATAT CGTCGCGCAT
GCCGATTCGA AGCTCACGCT CAAGCCCGTC ACCGATCTCT CCGACGATCT GAGCCTCGAC
GCGCTCGCCG CGGCGTCGGC CGACGAGAAC GCCGCGCCGA TCGACGCGCA CGTCGCGGGC
GCGGCGAAGC TGATGCGCGC GCGCGCCGTG CCGGGCACCG ACTGGCTGAC CGTCGTCGCG
CTCGACAAGT CCGATGCGAC GGCCGGCATG CATTCGCTGC TGCTCGTCTC GATCGGCACG
CTTGTCGCGC TTGCCGCCGT CGCCGCGCTG ATCGTCGGCG CGATCACGGG CGTCGCGTTT
CGCGGGCTCG CGCGCATTCG CGACGCGATG GAATCGATCG GCTCCGGCAC GGGCGATCTG
ACGCAGCGGC TGCCCGATAG CGGCCGCGAC GAAGTGGCGC AGATCGCGCG CTCGTTCAAC
GCGTTCGTCA GCAAGCTGCA GGAGGTGATG CGCGTGATCC GCGACGCGAG CGAATCGGTG
CGGCATGCGG CGGGCGAGAT CGCGTCGGGC AATCACGATC TGTCGCGCCG CACGGAATCG
GCGGCGGCGA GCCTGCAGCA GACGGCCGCG TCGATCGAGG AGATCACGTC GACGGTCACG
CAATCGGCAG GCGCCGCGCG CCAGGCGAAC GACATCGCGA CGAACGCGGC GAGCGTCGCG
TCGCGCGGCG GCACGGTCGT GTCCGACGTC GTGTCGACGA TGCACGAGAT CGAAGGCGCG
TCCGGCAAGA TCGCCGACAT CATCGGCGTG ATCGACGGCA TCGCGTTCCA GACCAATATC
CTCGCGTTGA ACGCGGCCGT CGAGGCGGCG CGCGCGGGCG AGGAGGGGCG CGGCTTCGCG
GTGGTCGCGG GCGAGGTGCG CTCGCTCGCG CAGCGCAGCG CGCAGGCGGC GAAGGAAATC
AAGGCGCTGA TCGATTCGAG CGTGACGAGC GTGTCGACGG GCGCCACGCT CGTCCAGCAG
GCCGGGCAGA CGATGAGCGA CATCGTCGGC ACGGTTTCGA ACGTGACGAC GATCATGCGC
GAGATCTCGA ATGCCGCCGA CGAACAGACG CGCGGCATCC AGGAAGTGAA TCGCGCGGTC
GCGCAGCTCG ACGAGATGGT TCAGCAGAAC GCGGCGCTCG TCGAGCAGTC GGCCGCGGCC
GCCTCGGCGT TGCAGACTCA GGCGGTCGAG CTCGCCGACG CGGTCGGGCA GTTCAAGGTC
GCGTGA
|
|---|
| Protein sequence | MLSSIRSRIL VACLAIVIGS LVINTALNYF VANRYNRESI SQNLSAVLTG HEAGIADWVA
SKTQMIVSVE DAAISPDPIP ALKQIAAAGG FTNVYVGYAD KTAKFSDPTG IPPDYDPTGR
PWYKQAAQAG KPVVTPPYVD VGTGKLVVAF AAPIMRDGAL KGVVSGDVAM DSVIANVKAI
HPTPGSFGML VDRSGHIVAH ADSKLTLKPV TDLSDDLSLD ALAAASADEN AAPIDAHVAG
AAKLMRARAV PGTDWLTVVA LDKSDATAGM HSLLLVSIGT LVALAAVAAL IVGAITGVAF
RGLARIRDAM ESIGSGTGDL TQRLPDSGRD EVAQIARSFN AFVSKLQEVM RVIRDASESV
RHAAGEIASG NHDLSRRTES AAASLQQTAA SIEEITSTVT QSAGAARQAN DIATNAASVA
SRGGTVVSDV VSTMHEIEGA SGKIADIIGV IDGIAFQTNI LALNAAVEAA RAGEEGRGFA
VVAGEVRSLA QRSAQAAKEI KALIDSSVTS VSTGATLVQQ AGQTMSDIVG TVSNVTTIMR
EISNAADEQT RGIQEVNRAV AQLDEMVQQN AALVEQSAAA ASALQTQAVE LADAVGQFKV
A
|
|---|
| |