More than 300 homologs were found in PanDaTox collection
for query gene Lcho_1532 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
853 aa  1712    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.36 
 
 
890 aa  359  9.999999999999999e-98  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.8 
 
 
1019 aa  348  2e-94  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  30.28 
 
 
860 aa  307  5.0000000000000004e-82  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.35 
 
 
1123 aa  301  5e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  56.9 
 
 
555 aa  296  9e-79  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  30.27 
 
 
767 aa  295  3e-78  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  31.54 
 
 
863 aa  293  1e-77  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  30.88 
 
 
657 aa  289  2e-76  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.67 
 
 
665 aa  289  2e-76  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
657 aa  289  2e-76  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
656 aa  288  2e-76  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
664 aa  288  2.9999999999999996e-76  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  30.67 
 
 
664 aa  287  5.999999999999999e-76  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
656 aa  287  5.999999999999999e-76  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  54.86 
 
 
551 aa  281  3e-74  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.03 
 
 
864 aa  280  6e-74  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  30.19 
 
 
654 aa  280  8e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  54.84 
 
 
551 aa  278  3e-73  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  52.94 
 
 
543 aa  270  7e-71  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0333  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.67 
 
 
720 aa  268  2.9999999999999995e-70  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  58.05 
 
 
541 aa  267  5.999999999999999e-70  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  48.3 
 
 
550 aa  265  2e-69  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  54.58 
 
 
547 aa  260  9e-68  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  35.33 
 
 
679 aa  248  3e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  55.34 
 
 
772 aa  248  3e-64  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  35.5 
 
 
679 aa  248  4.9999999999999997e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_007760  Adeh_3704  methyl-accepting chemotaxis sensory transducer  52.99 
 
 
559 aa  245  1.9999999999999999e-63  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  50 
 
 
551 aa  245  1.9999999999999999e-63  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
561 aa  243  7.999999999999999e-63  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_004347  SO_2323  methyl-accepting chemotaxis protein  45.92 
 
 
646 aa  243  1e-62  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_3844  methyl-accepting chemotaxis sensory transducer  53.69 
 
 
556 aa  243  1e-62  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  50 
 
 
551 aa  242  2e-62  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3761  methyl-accepting chemotaxis sensory transducer  52.99 
 
 
557 aa  242  2e-62  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  50 
 
 
550 aa  243  2e-62  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  32.43 
 
 
792 aa  241  4e-62  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  34.25 
 
 
945 aa  239  1e-61  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  50.36 
 
 
652 aa  239  2e-61  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  52.14 
 
 
532 aa  238  5.0000000000000005e-61  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  44.26 
 
 
677 aa  236  1.0000000000000001e-60  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  51.38 
 
 
509 aa  235  2.0000000000000002e-60  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  29.44 
 
 
678 aa  235  3e-60  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  48.64 
 
 
558 aa  234  6e-60  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  46.21 
 
 
659 aa  233  9e-60  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_011145  AnaeK_3602  methyl-accepting chemotaxis sensory transducer  51 
 
 
509 aa  232  2e-59  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  49.26 
 
 
617 aa  231  4e-59  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.66 
 
 
888 aa  231  5e-59  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  49.65 
 
 
682 aa  231  6e-59  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  47.81 
 
 
690 aa  230  8e-59  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  49.26 
 
 
621 aa  230  8e-59  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  47.56 
 
 
553 aa  230  9e-59  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  47.23 
 
 
553 aa  230  9e-59  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  47.23 
 
 
553 aa  229  1e-58  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  44.22 
 
 
676 aa  229  2e-58  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
597 aa  228  5.0000000000000005e-58  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  48.53 
 
 
686 aa  227  7e-58  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  51 
 
 
608 aa  227  8e-58  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  31.02 
 
 
1029 aa  226  1e-57  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
554 aa  225  2e-57  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  54.44 
 
 
563 aa  226  2e-57  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  50.98 
 
 
969 aa  225  3e-57  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  46.1 
 
 
674 aa  224  4e-57  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  32.92 
 
 
775 aa  223  9.999999999999999e-57  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  49.41 
 
 
1500 aa  222  1.9999999999999999e-56  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3513  methyl-accepting chemotaxis sensory transducer  52.96 
 
 
509 aa  221  3.9999999999999997e-56  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.150611  n/a   
 
 
-
 
NC_011891  A2cp1_1322  methyl-accepting chemotaxis sensory transducer  50.18 
 
 
538 aa  220  8.999999999999998e-56  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  47.35 
 
 
675 aa  220  1e-55  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
566 aa  219  2e-55  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  43.1 
 
 
720 aa  219  2e-55  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_011145  AnaeK_1220  methyl-accepting chemotaxis sensory transducer  49.1 
 
 
538 aa  219  2e-55  Anaeromyxobacter sp. K  Bacteria  normal  0.307637  n/a   
 
 
-
 
NC_011145  AnaeK_2401  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
528 aa  218  2.9999999999999998e-55  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
576 aa  218  2.9999999999999998e-55  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  32.02 
 
 
793 aa  218  2.9999999999999998e-55  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
868 aa  216  9.999999999999999e-55  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  45.18 
 
 
823 aa  213  1e-53  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2159  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
561 aa  213  2e-53  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.182871  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  30.74 
 
 
797 aa  213  2e-53  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.16 
 
 
1046 aa  212  3e-53  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
727 aa  211  6e-53  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  49.8 
 
 
962 aa  210  8e-53  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  45.55 
 
 
735 aa  210  9e-53  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  43.77 
 
 
553 aa  209  1e-52  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1627  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
733 aa  209  1e-52  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.426202  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
735 aa  209  1e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  43.77 
 
 
553 aa  209  1e-52  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  45.88 
 
 
494 aa  209  2e-52  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  47.86 
 
 
566 aa  208  3e-52  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04751  chemotaxis protein  53.61 
 
 
698 aa  209  3e-52  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
1048 aa  208  3e-52  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  47.08 
 
 
568 aa  207  6e-52  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
1049 aa  207  7e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  47.21 
 
 
554 aa  206  1e-51  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  42.72 
 
 
780 aa  206  1e-51  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
780 aa  206  2e-51  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  45.77 
 
 
705 aa  205  3e-51  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  46.76 
 
 
563 aa  204  4e-51  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  53.57 
 
 
581 aa  204  5e-51  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0873  methyl-accepting chemotaxis sensory transducer  51.89 
 
 
591 aa  203  9.999999999999999e-51  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  49.19 
 
 
1093 aa  202  1.9999999999999998e-50  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  42.21 
 
 
552 aa  202  1.9999999999999998e-50  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
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