| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1280 |
|---|
| Symbol | |
|---|
| ID | 8136606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1493617 |
|---|
| End bp | 1496763 |
|---|
| Gene Length | 3147 bp |
|---|
| Protein Length | 1048 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644868893 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003021098 |
|---|
| Protein GI | 253699909 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 0.0818053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTGGT TTCACGATTT GAAGCTGGGC GCGAAACTGA TGACGGGGTT TATTTCCGTC
GCCCTCATAG CCGCGGTGAT CGGCTATGTC GGCATAATGA AGCTGAAGGC AATCGACGAG
GCTGACATAA GGCTGTACGA AAAGATCACT ATTCCTATCT CTCAGCTCCA GAAGATCTCC
ACCTCCTTCC AGAGGATCCG CATCAATATC CGCGACATGG TCGCGGCGAC CGACGCCGGC
GAGCGCAAGA GCTCCGGTGA CGGCATCGTC CAGTTGCGCG AAGAGATCAA CAAGACTTCC
GCCGAGTTCG AGAAGACCAT CATGACCGAG GAGGAGCGCA AGCTCTTCGC CGAGTTCGAG
CGGGCCCACG GGGTGTACGG CCCGCGGCTG GACGAGATGG TCCAAATGGC CAAGGCGAAC
CGGACCCAGG AGGCGCACGC GCTGATGATG GGGGACGGCG CCAAGGGGGC CAAGGAGGAG
CAGGCAGCTA TCGACGCCCT GGTGGAAGCG AAACTCGCCC AAGCGAAGCT CACCGCCGAC
GGCAACAAAG CCCTTGCCCA GAGCGCCACC ACCTTCTTGC TGGCCCTGCT CGCGGCCGGG
GTGCTCCTGG CGGTCGCCTT GGGGTACTTC ATCACCAAGC TGGTGCAGGG ACAGCTGGGA
GCCGACCCCA AAGAGGTGAG CGAGGTGGCG AGCCGAGTCG CGAAGGGCGA CATGTCGGTC
GCCATCGATC TCGCCGGGAA GAAGGGGGAC AGCGTGATGG CCGCCATGCA CTCCATGGTC
GAGTCGATCA AGGCGCTGGT CGCCGACACG GCGCTGCTCT CCGAGGCGGC CGTGGCCGGA
AAGCTCGCCA CCCGCGCCGA CGCAGGCAGG CACGAAGGTG ACTTCAAGAA GATCGTGCAG
GGGGTGAACG ACACGCTGGA CGCGGTGATA GGACCTCTGA ACGTGGCGGC GGAGTACGTG
GACCGGATCT CGAAGGGGGA CATCCCGCCG AGAATCACCG ACAGCTACAA CGGCGACTTC
AACGAGATCA AGAACAACGT GAACCAGTGC GTGGAGACCT TGAACGCGCT GATCTCGGAC
ATGAACAACA TGTCAGCCCA GCACGACCTG GGGGACATCG ACGTGCAGAT CGAGGCCGAG
AGCTACCAGG GGGTCTACCG GCAGATGGCG GCCGGGGTTA ACAACATGGT GAACGGCCAC
ATCGCGGTGA AGAAGAAGGC GATGGCCTGC ATCGGCGAGT TCGGGCGCGG CAACTTCGAG
GCGCCGCTGG AGCAGTTCCC CGGGAAGAAG GCCTTCATCA ACGACACCAT CGAGCAGGTG
CGGGTGAACC TGAAGGCGCT GATCGCCGAC GCCGACATGC TGGCCGAGGC CGCCGTGGCC
GGAAATCTCG CCACCCGCGC CGACGCAGGC AGGCACCAGG GGGACTTCAG GAAGATCGTG
CAGGGGGTGA ACGACACGCT GGACGCGGTG ATCGGGCCGC TGAACGTGGC GGCGGAGTAC
GTGGACCGGA TCTCGAAGGG GGACATCCCG CCGAGAATCA CCGACAGCTA CAACGGCGAC
TTCAACGAGA TCAAGCAGAA CCTCAACAAC TGCATCGACA TCATGAACAA CCTCCTTGCC
GAGGCGGACA AGGTGGTCGA GGCTGCGGCG GAGGGGAGGC TCGACGAACG GGCGAACCCG
CAACTTTTTG TCGGCGGCTG GAAGGAACTC GTCGTCGGGG TGAACAACAT CGTCGCGAAC
ATCGTAAATC CCCTAATGGT AACGGCAGAT TATGTCGATA AGGTGGCAAA AGGCGTGATC
CCGCCGACGA TCGTGACGGA GTACAAGGGG CAGTACAACA TCATCAAGGA GAACCTGAAC
GCTGTGGTGA AGATGATGAA CGAGCTCCTG GAGCAGACGG ACATCATCAT CAAGGCCGCG
GCCGACGGCG ACCTGGACCG CCGCGCCGAC GCCTCGCTCT TCGTCGGGGG GTGGAACAAG
CTGGTGGCAG GGGTGAACGA CACGGTGACC AACATCGTCA ACCCCCTCAT GGTGACGGCC
GACCACGTGG ACCGCATCGC CAAGGGGGAC ATGCCACCGA CGATCACCGC CGAGTACAAG
GGGCAGTACA ACCTGATCAA GAACAACCTG AACGTGCTGA TCGAGGCGAT CAACAAGATA
ACGGACGCGG CCAAGGAGGT CTCCAACGGG AACCTCATGG TGAGCCTGAA GGAGCGTTCG
GCGCAGGACG AGCTGATTCA GGCGCTCTCC GCCATGGTCG GGAAGATCAC CGAGGTGGTG
ACCGAGGTGA AGCAGGCGGC CGACAACGTG GCCAGCGGGA GCGTGCAGCT CTCCGCCAAC
GCCCAGTCCA TGTCGGAAGG GGCCTCGCAG CAGGCGGCGG CGGCCGAGGA AGCCTCCTCC
TCCATGGAGG AGATGTCGGC CAACATCAGG CAGAACGCGG ACAACGCCAT GCAGACGGAG
AAGATCGCGG TGAAGTCGTC CGCCGACGCT CAGGAAGGGG GCAAGGCGGT CGCCGAGACG
GTGCAGGCGA TGAAGGACAT CGCCGGGAAG ATCTCCATCA TCGAGGAGAT CGCGCGGCAG
ACCAACATGC TGGCACTGAA CGCGGCCATC GAGGCGGCGC GCGCGGGCGA GCACGGCAAA
GGGTTCGCGG TGGTGGCCTC CGAGGTGAGA AAGCTCGCCG AGAGAAGCCA GGTGGCGGCG
GGGGAGATCT CGGAGCTTTC GGTTTCCAGT GTCGAGGTGG CCGAGAAGGC CGGGGAGATG
CTTTCCGGCA TCCTTCCCGA CATTCAGAAG ACGGCGGAGC TGGTGCAGGA GATCAACGCC
TCCAGCAAGG AACAGGACAC CGGCGCCCAG CAGATCAACA AGGCGATCCA GCAGCTGGAC
CAGGTGATCC AGCAAAACGC GTCCGCCAGC GAGGAGATGG CCTCCACCGC GGAGGAGCTC
TCTTCCCAGT CGGCGCAGCT GCAGTCGACC ATAGCCTTCT TCAGGGTCGA CAACTCCGCC
GGAGCGCATC AGGCGGCGAA GCATCTCACC AAGTCCGTCT CGAAGGGTGC CGCTAAGGTC
AAGCAGGCGC CGGTAACCAA GCGCGCCATC GGGCACGACC TGGCCATGTC CGATCCGGAG
CAGGACACGG AGTTCGAAAG GTTTTAA
|
|---|
| Protein sequence | MRWFHDLKLG AKLMTGFISV ALIAAVIGYV GIMKLKAIDE ADIRLYEKIT IPISQLQKIS
TSFQRIRINI RDMVAATDAG ERKSSGDGIV QLREEINKTS AEFEKTIMTE EERKLFAEFE
RAHGVYGPRL DEMVQMAKAN RTQEAHALMM GDGAKGAKEE QAAIDALVEA KLAQAKLTAD
GNKALAQSAT TFLLALLAAG VLLAVALGYF ITKLVQGQLG ADPKEVSEVA SRVAKGDMSV
AIDLAGKKGD SVMAAMHSMV ESIKALVADT ALLSEAAVAG KLATRADAGR HEGDFKKIVQ
GVNDTLDAVI GPLNVAAEYV DRISKGDIPP RITDSYNGDF NEIKNNVNQC VETLNALISD
MNNMSAQHDL GDIDVQIEAE SYQGVYRQMA AGVNNMVNGH IAVKKKAMAC IGEFGRGNFE
APLEQFPGKK AFINDTIEQV RVNLKALIAD ADMLAEAAVA GNLATRADAG RHQGDFRKIV
QGVNDTLDAV IGPLNVAAEY VDRISKGDIP PRITDSYNGD FNEIKQNLNN CIDIMNNLLA
EADKVVEAAA EGRLDERANP QLFVGGWKEL VVGVNNIVAN IVNPLMVTAD YVDKVAKGVI
PPTIVTEYKG QYNIIKENLN AVVKMMNELL EQTDIIIKAA ADGDLDRRAD ASLFVGGWNK
LVAGVNDTVT NIVNPLMVTA DHVDRIAKGD MPPTITAEYK GQYNLIKNNL NVLIEAINKI
TDAAKEVSNG NLMVSLKERS AQDELIQALS AMVGKITEVV TEVKQAADNV ASGSVQLSAN
AQSMSEGASQ QAAAAEEASS SMEEMSANIR QNADNAMQTE KIAVKSSADA QEGGKAVAET
VQAMKDIAGK ISIIEEIARQ TNMLALNAAI EAARAGEHGK GFAVVASEVR KLAERSQVAA
GEISELSVSS VEVAEKAGEM LSGILPDIQK TAELVQEINA SSKEQDTGAQ QINKAIQQLD
QVIQQNASAS EEMASTAEEL SSQSAQLQST IAFFRVDNSA GAHQAAKHLT KSVSKGAAKV
KQAPVTKRAI GHDLAMSDPE QDTEFERF
|
|---|
| |