Gene Mmc1_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0628 
Symbol 
ID4481921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp761615 
End bp763642 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content57% 
IMG OID639721371 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_864555 
Protein GI117923938 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAAA ATCTTGGGCT GGCCAAAAAA ATTGGTATGG GTATCGGCGT TGTGCTGCTG 
CTGTTGTCGG TGGTGGGGGT GGTCGCCCAC CAAGGTATCT CGCATATGGT GGCGGATGGT
TTAGAGGTGG TGGGGGGCAA CCGGCTGCGG GGCGCGATTC TACAGCGAGA GATTGACCAT
CTTAACTGGG CAGGCAAAGT AAGCGCTTTC ATTAATGATG AGCATGCCGG TGAACTCAAA
GTGCAGCTTG ACCCCACCCA ATGCGCCTTC GGCCAATGGT ACTACGGCCA GGGTCGCAAA
GATGCCGAAA AGTTGGTTCC CGCCTTAACG CCCCTGCTGG GCGAGATTGA AGAGCCCCAC
CAGCGTTTGC ATGCCTCTGC GGCTGAAATT AAAGCCAAAC ACCGCCCGGT AGACAGCGGT
TTACCCCGGT TTTTGGCAGA AAAAGAGACC GACCATGTGG TGTGGTCCGA TCAAGTACTC
ACCGATTTGG TGGACCAAAA AACCAGCCTC TCTGTACAGT TAGATTATAC CAAGTGCGGC
TTGGGACAAT TTATCTATGG TGGCGAGGGT AAGAAGATGG CCCAGGATAA CCAACTGGGG
GTGCTGCTTA ACCGCATGGA GCCAGCCCAC AAACGTCTAC ATACCCTAGG AGGGCAGATT
AATGCCGCCC TTGCGCAGGG CGAGCGTGAT CGGGCCATGC AGATTTACCG CCATGAGGTT
AAAAAAGTGC TGCACGAGGT CCGTACCTAC CTCAAGGAGA TGCAACTGCG TGCCCAGGGC
AACCTTAAAG TGCGGGATGA GGTCAATGCG ATTTTTGTGC AACAGACCCA AAAATATCTG
AGCCATCTTC AAGCGCTGTT CCATAAAATG GATCAGGCGG TAGCGGATAA TGTGATGTCC
GAGGATGTGA TGGTCGCCGG CGGGCAGCAG ACCCGTGCAT CGGTGGCAAC CCTGTCGATT
ATTGCGCTGC TGGTAGGGAT TGTGTTGGCG GTGCTTATTG CCCGCTCCAT TGTGCGGCCA
ATCCAGGCCG GGGTCCAGGT GGTGCAACGC ATTGCCAGCG GCGACCTAAG CAGCCGCTGC
GCCACCAGCC GCCAAGATGA AGTGGGGCAG ATGCTGGGCG CTTTGGATGG TATGGTGGGC
AAGTTGCGCG AGGTGGTTAC AGATATTGAG GTGGCCGCCA GCCAAGTTAG CCTGGGCAGT
AATGAGCTTT CGGTGGGGGC GCAAGTGCTC TCTGACGGAG CCTCTCAGCA GGCGGCTTCG
ATAGAAGAGA CCTCCTCGGC AATGGAGGAG ATCTCCTCCA ATATTCAGCA AAGCGCTGAA
AATGCCCAAG AGACCGAAAG GATCGCCAAT AAAGCTTCCC AAGATGCCCA GCAGGGTGGT
GAAGCGGTGA CGCTGGCTGT AAAAGCCATG CATGAAGTGG CCAGTAAAAT TTCCATTATC
GAGGAGATCG CGCGGCAAAC CAACCTGCTG GCACTCAATG CCGCCATTGA AGCGGCCCGG
GCTGGCGAGC ATGGCAAGGG TTTCGCGGTG GTGGCTTCCG AGGTGCGCAA ACTGGCCGAG
CGCAGTCAAA CGGCTGCGGG CGAGATTAGC CAAATGTCGT CCAGTAATGT GCAACTGGCG
GGGCGTACTG AGCAGATTAT TGATGCCTTG GTGCCCGATA TTCAACGCAC CGCTAAGCTG
GTACGGGGCA TCGCGCTATC GGCGCAGGAG CAGACGCAAG GGGTGGGGCA GGTCAACAGT
GCCATTCAAC AACTGGATCA GGTGATCCAG CAAAACGCAG GGGCTGCTGA GCAGATGGCC
GCCACCGCCG AGCAGTTGTC TGCTCAGTCA GAGGTTATGC AAGCCTCCAT CGCCTTTTTT
AAATTGGCCT CGGATGCCGC ACCAAACCGC GCTGGGGTGA TGGCTGTGGC CCAACACCTG
CCAACCGGTT CGGCTGGCCA AACCAAACCA GCGCTACCCC GTCGCGTGGA TGGAGCTAAG
GGTGGGCAAC GAGCTGATGC CGGAGATCGG GACTATGAGC GTTTTTAA
 
Protein sequence
MWQNLGLAKK IGMGIGVVLL LLSVVGVVAH QGISHMVADG LEVVGGNRLR GAILQREIDH 
LNWAGKVSAF INDEHAGELK VQLDPTQCAF GQWYYGQGRK DAEKLVPALT PLLGEIEEPH
QRLHASAAEI KAKHRPVDSG LPRFLAEKET DHVVWSDQVL TDLVDQKTSL SVQLDYTKCG
LGQFIYGGEG KKMAQDNQLG VLLNRMEPAH KRLHTLGGQI NAALAQGERD RAMQIYRHEV
KKVLHEVRTY LKEMQLRAQG NLKVRDEVNA IFVQQTQKYL SHLQALFHKM DQAVADNVMS
EDVMVAGGQQ TRASVATLSI IALLVGIVLA VLIARSIVRP IQAGVQVVQR IASGDLSSRC
ATSRQDEVGQ MLGALDGMVG KLREVVTDIE VAASQVSLGS NELSVGAQVL SDGASQQAAS
IEETSSAMEE ISSNIQQSAE NAQETERIAN KASQDAQQGG EAVTLAVKAM HEVASKISII
EEIARQTNLL ALNAAIEAAR AGEHGKGFAV VASEVRKLAE RSQTAAGEIS QMSSSNVQLA
GRTEQIIDAL VPDIQRTAKL VRGIALSAQE QTQGVGQVNS AIQQLDQVIQ QNAGAAEQMA
ATAEQLSAQS EVMQASIAFF KLASDAAPNR AGVMAVAQHL PTGSAGQTKP ALPRRVDGAK
GGQRADAGDR DYERF