More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_3251 on replicon NC_009429
Organism: Rhodobacter sphaeroides ATCC 17025



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_3708  methyl accepting chemotaxis protein  74.01 
 
 
553 aa  735    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  100 
 
 
552 aa  1074    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  73.47 
 
 
553 aa  732    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  52.34 
 
 
551 aa  483  1e-135  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  51.6 
 
 
561 aa  443  1e-123  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  49.48 
 
 
551 aa  444  1e-123  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  51.43 
 
 
561 aa  441  9.999999999999999e-123  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  51.42 
 
 
562 aa  441  9.999999999999999e-123  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  48.48 
 
 
547 aa  411  1e-113  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  50.2 
 
 
534 aa  396  1e-109  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  50.2 
 
 
534 aa  394  1e-108  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
560 aa  365  1e-100  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  44.79 
 
 
560 aa  365  1e-100  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009429  Rsph17025_3682  hypothetical protein  48.64 
 
 
519 aa  365  1e-99  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.552968 
 
 
-
 
NC_007494  RSP_3432  methyl-accepting chemotaxis protein  50.3 
 
 
519 aa  364  3e-99  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0745866  n/a   
 
 
-
 
NC_009050  Rsph17029_3077  methyl-accepting chemotaxis sensory transducer  50.3 
 
 
519 aa  364  3e-99  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.268982  normal  0.422774 
 
 
-
 
NC_007494  RSP_3108  putative methyl accepting chemotaxis protein  48.93 
 
 
562 aa  356  7.999999999999999e-97  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3837  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
562 aa  355  2e-96  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  45.79 
 
 
564 aa  350  4e-95  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  41.15 
 
 
611 aa  345  1e-93  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  42.54 
 
 
569 aa  342  1e-92  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  59.57 
 
 
705 aa  337  1.9999999999999998e-91  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
560 aa  335  1e-90  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
569 aa  335  2e-90  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
569 aa  328  1.0000000000000001e-88  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  44.08 
 
 
544 aa  324  3e-87  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  39.79 
 
 
566 aa  318  1e-85  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  51.97 
 
 
693 aa  315  9.999999999999999e-85  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
677 aa  315  9.999999999999999e-85  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
676 aa  315  1.9999999999999998e-84  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  52.49 
 
 
691 aa  313  3.9999999999999997e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  39.59 
 
 
566 aa  311  1e-83  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
602 aa  310  2.9999999999999997e-83  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  49.17 
 
 
734 aa  308  1.0000000000000001e-82  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  45.88 
 
 
738 aa  308  1.0000000000000001e-82  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  36.54 
 
 
558 aa  308  1.0000000000000001e-82  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
602 aa  305  2.0000000000000002e-81  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  46.96 
 
 
576 aa  302  1e-80  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  39.62 
 
 
606 aa  301  2e-80  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  55.94 
 
 
637 aa  300  4e-80  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  42.55 
 
 
566 aa  300  6e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  51.62 
 
 
1500 aa  298  1e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  45.4 
 
 
702 aa  294  3e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009431  Rsph17025_4277  hypothetical protein  42.63 
 
 
555 aa  293  5e-78  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.280884  normal 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  47.28 
 
 
733 aa  292  1e-77  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  52.33 
 
 
747 aa  292  1e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  51.2 
 
 
554 aa  291  2e-77  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  39.59 
 
 
563 aa  290  3e-77  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  50.92 
 
 
597 aa  290  3e-77  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  50.8 
 
 
619 aa  290  5.0000000000000004e-77  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  54.2 
 
 
640 aa  290  5.0000000000000004e-77  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  48.4 
 
 
609 aa  290  7e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  49.74 
 
 
568 aa  287  4e-76  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  53.66 
 
 
546 aa  286  5.999999999999999e-76  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
581 aa  285  1.0000000000000001e-75  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
674 aa  283  4.0000000000000003e-75  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  52.11 
 
 
640 aa  282  1e-74  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  39.14 
 
 
568 aa  281  2e-74  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  52.11 
 
 
640 aa  281  2e-74  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
563 aa  281  2e-74  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  55.63 
 
 
554 aa  281  2e-74  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  55.13 
 
 
548 aa  280  4e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  37.39 
 
 
551 aa  278  2e-73  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
547 aa  277  3e-73  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  50 
 
 
868 aa  278  3e-73  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  46.54 
 
 
690 aa  276  7e-73  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  52.57 
 
 
774 aa  274  4.0000000000000004e-72  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  50.13 
 
 
599 aa  273  4.0000000000000004e-72  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  53.12 
 
 
553 aa  273  6e-72  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  48.88 
 
 
675 aa  273  8.000000000000001e-72  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  53.66 
 
 
969 aa  271  2e-71  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  51.14 
 
 
494 aa  270  2.9999999999999997e-71  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  47.44 
 
 
550 aa  270  5e-71  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  51.74 
 
 
962 aa  270  5.9999999999999995e-71  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  54.7 
 
 
823 aa  270  7e-71  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  48.69 
 
 
543 aa  268  1e-70  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.17 
 
 
1046 aa  268  2e-70  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
617 aa  267  2.9999999999999995e-70  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  50 
 
 
650 aa  267  4e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  55.88 
 
 
621 aa  266  1e-69  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  51.33 
 
 
727 aa  265  2e-69  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  51.96 
 
 
735 aa  265  2e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  56.57 
 
 
686 aa  265  2e-69  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  53.08 
 
 
608 aa  265  2e-69  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  47.09 
 
 
846 aa  264  3e-69  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3065  methyl-accepting chemotaxis sensory transducer  44.63 
 
 
524 aa  263  8e-69  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.60396 
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  38.25 
 
 
551 aa  262  1e-68  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  51.66 
 
 
735 aa  262  1e-68  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3420  methyl-accepting chemotaxis protein  44.63 
 
 
524 aa  261  3e-68  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  47.44 
 
 
682 aa  261  3e-68  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  50.17 
 
 
509 aa  260  5.0000000000000005e-68  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  54.01 
 
 
727 aa  259  7e-68  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  52.92 
 
 
1093 aa  259  8e-68  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  45.99 
 
 
551 aa  259  8e-68  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.55 
 
 
1089 aa  259  1e-67  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  53.76 
 
 
652 aa  259  1e-67  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.99 
 
 
1088 aa  258  2e-67  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  48.52 
 
 
659 aa  258  2e-67  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  47.21 
 
 
720 aa  257  4e-67  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  46.65 
 
 
551 aa  256  6e-67  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>