| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3891 |
|---|
| Symbol | |
|---|
| ID | 5085439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 789027 |
|---|
| End bp | 790682 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640485450 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170051 |
|---|
| Protein GI | 146279893 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.452082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA ACATCAAGAT CAAGCTGGCC GGTGCCTTCT TCCTGGTCTT CCTGCTCATG
GGAACCGGCA CGATACTGGG AATCATCGAT CTGCGGCACT CGAACCAGGT GCTCCAGACG
ATCGTCGAGA AACAGGCCGC GCGCGTCGAG TCAGCGAGCC GGCTGGAGAT CCAGCAGACA
CAGTTCAACG TCGTCCTGCG GGACTATGTG GTCGCCGAGG ATGAGGCCAA ACGCGCCGCG
CTCAAGCAGG ACATCGTGCA GATCCGCGCC GACATGAGCG CAAGCATCGA GCGGCTCGAG
GCGCTGGCCG ACGATGTCGG GATGCCGATG ATCAAGGCCT ATGCCGAGCA GCGCAAGGCC
GCCGCCGCGA TCAACAACCG CGTGTTCGAG CTTGCCGATG GCGGCGATAC GGCGGCCGCC
TCGCGCCTGC TTGCCGGCGA GGCGCGTCAG GGAATGGAGA AGCTCGCCGC CAATCTCGAG
GCCTTCCGCA GCACCTACAG CAACCAGATG GCTGAGGCGA CCGCCTCTGC CAGCCGCGAT
CTGGCGGCGA GCGTGCTCAA CCTGTCCCTC CTCGCTCTGG CCGGGGTGCT GTTCGGGACA
ATCGCCGCCA CGCTCGTGAC GGCCTCGATC GCGCGGGGCC TTCAGCGGAC ACTGGACCTG
ACGCAACGCG TTGCGCACGG TGATCTGACG ACGCTGGCCG ATGACCGGGG CTCGGACGAG
ATCGCGCAAC TGCTCAAGGC GAGCAACTCG ATGATCCTCC GCCTCCGCGA GGTCGTGGGC
CGCGTCACGC TTGCGACCAA TCAGGTGGCC GCCAACAGCC GGATCATGGC CTCCACGTCC
GAGCAGCTGT CGCAGGGCAG CAGCGAACAG GCCTCGTCCA CGGAAGAAGC GTCCGCCTCG
GTCGAGCAGA TGGCGGCCAA CATCAAGCAG ACGGCGGACA ACTCCGCCCG CACGGAACAG
ATTGCCATCA AATCGGCCGA GGATGCGCGT GCCTCCGGTG GCGCGGTGCG CGAGGCGGTG
TCGGCCATGG GTGCGATTGC CGAACGTATC CTCGTGGTGC AGGAGATCGC CCGTCAGACC
GATCTTCTGG CGCTCAACGC GGCTGTCGAG GCCGCCCGCG CAGGCGAGCA CGGACGCGGC
TTTGCCGTCG TCGCGGCCGA GGTGCGCAAG CTGGCCGAGC GGAGCCAGTC CGCGGCCGCG
GAAATCTCGC AGCTTTCGTC GCGGACCTCT GCAGCGGCTT CCACCGCGGG CGAAATGCTC
GAGCGGCTGG TGCCTGACAT CGAGCGCACC TCCACGCTTG TCTCCTCGAT CTCGGTCGCC
TCGCGCGAAC TTTCCACGGG GGCACAACAG GTGGCACTGG CGATCCAGCA GCTGGATCAG
GTGACCCAGC AGAACAGCCA CTCGGCAGAG GCTCTGGCCG AGGGGGCAGG AGAGCTGTCG
ACCGAAGCCG ACCAGCTCAA GGACGCGGTC GGGTTCTTCC TGATCGACGC GACGCCGGAG
CGGCCGGCCC GTGATCCTCA GCCCGCGCCG AAGTCCGCCC CGCCGGCCGT GCGCAAGCCT
GCCCTTCAAG TCGCCGCAAA ACCGAAGGGG TTCCACTTCG ACATCGGGGA GAGCGACATG
GACGAACTGG ACGCAGCGTT CCAGCGCACC GCCTGA
|
|---|
| Protein sequence | MKLNIKIKLA GAFFLVFLLM GTGTILGIID LRHSNQVLQT IVEKQAARVE SASRLEIQQT
QFNVVLRDYV VAEDEAKRAA LKQDIVQIRA DMSASIERLE ALADDVGMPM IKAYAEQRKA
AAAINNRVFE LADGGDTAAA SRLLAGEARQ GMEKLAANLE AFRSTYSNQM AEATASASRD
LAASVLNLSL LALAGVLFGT IAATLVTASI ARGLQRTLDL TQRVAHGDLT TLADDRGSDE
IAQLLKASNS MILRLREVVG RVTLATNQVA ANSRIMASTS EQLSQGSSEQ ASSTEEASAS
VEQMAANIKQ TADNSARTEQ IAIKSAEDAR ASGGAVREAV SAMGAIAERI LVVQEIARQT
DLLALNAAVE AARAGEHGRG FAVVAAEVRK LAERSQSAAA EISQLSSRTS AAASTAGEML
ERLVPDIERT STLVSSISVA SRELSTGAQQ VALAIQQLDQ VTQQNSHSAE ALAEGAGELS
TEADQLKDAV GFFLIDATPE RPARDPQPAP KSAPPAVRKP ALQVAAKPKG FHFDIGESDM
DELDAAFQRT A
|
|---|
| |