More than 300 homologs were found in PanDaTox collection
for query gene BBta_7836 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  63.41 
 
 
650 aa  703    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  100 
 
 
609 aa  1204    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  64.04 
 
 
640 aa  741    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  63.28 
 
 
566 aa  634  1e-180  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  76.66 
 
 
733 aa  602  1.0000000000000001e-171  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  72.71 
 
 
738 aa  592  1e-168  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  69.46 
 
 
734 aa  570  1e-161  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  53.02 
 
 
611 aa  519  1e-146  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  66.53 
 
 
702 aa  511  1e-143  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  48.64 
 
 
637 aa  498  1e-139  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  64.03 
 
 
691 aa  493  9.999999999999999e-139  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  63.66 
 
 
693 aa  479  1e-134  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  47.3 
 
 
640 aa  467  9.999999999999999e-131  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  51.74 
 
 
606 aa  464  1e-129  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  50.63 
 
 
602 aa  463  1e-129  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  51.04 
 
 
602 aa  463  1e-129  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  61.27 
 
 
747 aa  464  1e-129  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  46.27 
 
 
640 aa  457  1e-127  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  47.52 
 
 
569 aa  447  1.0000000000000001e-124  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  51.95 
 
 
599 aa  436  1e-121  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  56.55 
 
 
705 aa  434  1e-120  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  48.78 
 
 
560 aa  431  1e-119  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  47.36 
 
 
642 aa  407  1.0000000000000001e-112  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  46.77 
 
 
564 aa  403  1e-111  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  59.64 
 
 
774 aa  396  1e-109  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  46.06 
 
 
569 aa  397  1e-109  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
569 aa  394  1e-108  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  43.53 
 
 
617 aa  354  2.9999999999999997e-96  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
621 aa  353  4e-96  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  54.9 
 
 
554 aa  348  2e-94  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
608 aa  344  2.9999999999999997e-93  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  53.08 
 
 
1500 aa  343  7e-93  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  42.57 
 
 
553 aa  341  2e-92  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  42.75 
 
 
553 aa  341  2.9999999999999998e-92  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  50.23 
 
 
677 aa  340  4e-92  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
551 aa  335  1e-90  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  39.07 
 
 
552 aa  334  2e-90  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  48.4 
 
 
676 aa  333  4e-90  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  55.79 
 
 
619 aa  326  7e-88  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  46.98 
 
 
868 aa  326  1e-87  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  55.15 
 
 
566 aa  325  2e-87  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  60.76 
 
 
558 aa  324  3e-87  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  40.98 
 
 
560 aa  323  5e-87  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.85 
 
 
1046 aa  323  5e-87  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
560 aa  323  5e-87  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  52.3 
 
 
686 aa  322  9.999999999999999e-87  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  39.97 
 
 
561 aa  322  1.9999999999999998e-86  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  51.69 
 
 
727 aa  321  3e-86  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  47.29 
 
 
576 aa  320  3e-86  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  39.39 
 
 
561 aa  320  3.9999999999999996e-86  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  55.89 
 
 
780 aa  319  1e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  50 
 
 
780 aa  319  1e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
563 aa  318  2e-85  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  48.45 
 
 
720 aa  318  2e-85  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  51.75 
 
 
969 aa  317  3e-85  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  50.25 
 
 
727 aa  317  3e-85  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  56.57 
 
 
962 aa  317  4e-85  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  52.16 
 
 
823 aa  317  4e-85  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  51.31 
 
 
735 aa  316  9.999999999999999e-85  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  50.51 
 
 
735 aa  315  1.9999999999999998e-84  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  51.17 
 
 
659 aa  314  2.9999999999999996e-84  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  53.01 
 
 
494 aa  312  1e-83  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  56.51 
 
 
1089 aa  312  1e-83  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  52.31 
 
 
740 aa  312  1e-83  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  57.69 
 
 
1048 aa  311  2e-83  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  50.82 
 
 
597 aa  311  2e-83  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
554 aa  310  5.9999999999999995e-83  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  49.74 
 
 
846 aa  310  5.9999999999999995e-83  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  39.56 
 
 
568 aa  310  6.999999999999999e-83  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  60.98 
 
 
566 aa  309  6.999999999999999e-83  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  50.52 
 
 
1049 aa  309  1.0000000000000001e-82  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.82 
 
 
1088 aa  309  1.0000000000000001e-82  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  41.35 
 
 
568 aa  308  2.0000000000000002e-82  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  37.38 
 
 
551 aa  308  2.0000000000000002e-82  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  52.72 
 
 
563 aa  307  4.0000000000000004e-82  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  64.48 
 
 
581 aa  305  2.0000000000000002e-81  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  50.37 
 
 
685 aa  303  5.000000000000001e-81  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
546 aa  301  2e-80  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  59.56 
 
 
1093 aa  301  2e-80  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  46.95 
 
 
562 aa  299  1e-79  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  45.96 
 
 
548 aa  298  1e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1627  methyl-accepting chemotaxis sensory transducer  49.07 
 
 
733 aa  295  1e-78  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.426202  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  57.43 
 
 
652 aa  295  2e-78  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
553 aa  294  4e-78  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  60.13 
 
 
733 aa  293  6e-78  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  57.09 
 
 
674 aa  291  2e-77  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  37.23 
 
 
547 aa  288  2e-76  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  44.96 
 
 
534 aa  288  2e-76  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
690 aa  287  4e-76  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  44.7 
 
 
534 aa  286  5.999999999999999e-76  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
675 aa  286  8e-76  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
544 aa  284  3.0000000000000004e-75  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2159  methyl-accepting chemotaxis sensory transducer  53.36 
 
 
561 aa  280  6e-74  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.182871  n/a   
 
 
-
 
NC_012918  GM21_2421  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
816 aa  279  1e-73  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
555 aa  279  1e-73  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1826  methyl-accepting chemotaxis sensory transducer  58.97 
 
 
835 aa  278  2e-73  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
547 aa  278  2e-73  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  53.45 
 
 
543 aa  277  3e-73  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  36.58 
 
 
541 aa  275  2.0000000000000002e-72  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  50.52 
 
 
550 aa  273  6e-72  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
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