| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3947 |
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| Symbol | |
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| ID | 7387298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3314185 |
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| End bp | 3316044 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643652682 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002550863 |
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| Protein GI | 222149906 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.412994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGACGCGCA GTATGGCTGA TGGCGATACA TCGCGTCGCG CGCAGGTGGA CATTGCGACC
GGCGAAGCAA AGATGCTGCT GGACGCGGTC AACAGATTGC TCGACGCAGC TATGCGTCCA
GTCTCCGACC TCCGCGATGC CACGACTCGC ATGTCAGTGG ACCACGACAA GGGCGATATT
GATGCGATCC TTCCGGTCGA TGCCTTCAAG GGTGATCTTT CCGTCATGGC GAAGGGCATC
AACGAAATGG TCGCTGGCCA TATATCGGTA AAAAAGAAGG CGATGGCCTG CGTTCAGGAG
TTCAGCGAAG GAAATTTTGA GGCTGCGCTT GAGCGGTTCC CGGGCAAGAA GGCATTCATC
AATGACACGG TGGAAACTTT GCGTGGCAAT CTCAAGGGCT TTATCGCCGA AATGAACCGG
ATGTCCGCCG AGCACGATAA GGGTGATATC GACGTCTTCG TGCCTGTCGA GCGGTTTAAA
GGCGACTTTG CGGTGATGGC AAAGGGTGTC AACGACATGG TCAATGGCCA TATCGTTGTG
AAGAAAAAGG CAATGGCTTG CATCAAAGAA TTCGGCGAAG GCAATTTTGA CGCGGCGCTC
GAGCAATTTC CAGGAAAGAA GGCGTTCATC AACGAAACGG TAGAAACGCT GAGGAGCAAT
TTCCGAGACA TCGTCACCGA AATCCGCCGT TTAACCGTTG CGTCGACGGA AGGCAATTTG
AGCGAGCGAG GTGTCGCCAC TCGGTTTGTC GGAGATTTTT CCAAGATGGT TTCAGGGATA
AACGGCATGC TGGATGCCAT CCTGTTGCCG ATTGGTGAGG GCAATCGAGT ACTTAATCTC
GTCAGCACCG GCGATTTGAC GGAACATGTG GAGATTGCTT GTGAAGGCGA CCATCAGAAA
ATGAAGGATG CAATCAATTC ATTGGTCGAT AACCTGACGG CCTTTGCAAC GGGTGTTGCC
AGTGCGGCTG ATCAGGTGAC GAGCGGCAGC CAGGCGCTCT CCTCCACCTC CGAGCAGCTC
TCGCAGGGCG CGACAGAGCA AGCCTCTGCT GCTGAAGAGG CGTCGGCGTC CATGGAGCAG
ATGGCCGCTA ATATCAAGCA AACCGCCGAT AATGCATCAC AGACAGAGAA GATTGCCCGC
CAGTCTGCGA AAGATGCCGA GTTATCCGGC GAGGCGGTTG ATAAAGCCGT CAATGCGATG
CGAACGATCG CAGAAAAAAT TTCCATCGTT CAGGAAATCG CTCGTCAGAC AGATCTCCTG
GCACTGAACG CCGCGGTTGA AGCCGCCCGT GCAGGTGAGC ATGGCAAAGG CTTTGCTGTT
GTTGCATCCG AAGTCCGCAA GCTTGCTGAA CGTTCACAGG CCGCAGCAGG AGAGATCAGC
GGTCTGTCTA GCGAGACCGT CAAGGCAGCG ACCTCTGCTG GTGAAATGCT GCACCGGCTC
GTTCCTGATA TTCGCAAGAC CGCCGAACTC GTCACGGAAA TTTCGGCCTC CTGCCGTGAA
CAGGATTTGG GAGCCTCCCA GATAAACGAG GCCATTCAGC AATTGGACCA GGTCACGCAG
CATAATGCCA GTGCTTCGGA GGAAATGTCG GCCACCTCTG AAGAGCTTGC GTCTCAGGCG
GAAGAATTGC AGTCTTCGCT GACTTTCTTC CAGACCAGTG ACAATGGCGA TTCCCAGGCA
CGCAAATCGC GGGTGTCAAT TGCACCAGTT CGAAAGGCAG CGCCATCGGC CCAGCCGGTT
CGCAAGCCAA TGGCAAACCG ATCCGTTGCG GCGCAGCAAG CCCGCGCGAA GGGCTTTGCT
CTCGATCTTT CCATGGGTGG CCCTGACGCA GAAGATGATC GCTTTCATCA ACTCACTTAA
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| Protein sequence | MTRSMADGDT SRRAQVDIAT GEAKMLLDAV NRLLDAAMRP VSDLRDATTR MSVDHDKGDI
DAILPVDAFK GDLSVMAKGI NEMVAGHISV KKKAMACVQE FSEGNFEAAL ERFPGKKAFI
NDTVETLRGN LKGFIAEMNR MSAEHDKGDI DVFVPVERFK GDFAVMAKGV NDMVNGHIVV
KKKAMACIKE FGEGNFDAAL EQFPGKKAFI NETVETLRSN FRDIVTEIRR LTVASTEGNL
SERGVATRFV GDFSKMVSGI NGMLDAILLP IGEGNRVLNL VSTGDLTEHV EIACEGDHQK
MKDAINSLVD NLTAFATGVA SAADQVTSGS QALSSTSEQL SQGATEQASA AEEASASMEQ
MAANIKQTAD NASQTEKIAR QSAKDAELSG EAVDKAVNAM RTIAEKISIV QEIARQTDLL
ALNAAVEAAR AGEHGKGFAV VASEVRKLAE RSQAAAGEIS GLSSETVKAA TSAGEMLHRL
VPDIRKTAEL VTEISASCRE QDLGASQINE AIQQLDQVTQ HNASASEEMS ATSEELASQA
EELQSSLTFF QTSDNGDSQA RKSRVSIAPV RKAAPSAQPV RKPMANRSVA AQQARAKGFA
LDLSMGGPDA EDDRFHQLT
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