Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1300 |
Symbol | |
ID | 2688082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1421178 |
End bp | 1422869 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637125974 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_952353 |
Protein GI | 39996402 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTATCG GTGATCTCAA AATTGGCGTA CGGCTTGGTA TTGGATTTGG TGTTTTGCTC GTCCTACTGG GTGTCGTTAC CGTGGTCGGC ATCAATGGTA TGAAGGAGAT TAACTCAAAG CTGGATCGCA TTCTCAAGGT CAACTATGGG AAGATCAAGA ATGCCAATGA AGTCTCTATG GTCGTTGGCG ATTTGATGGG CAAGATCAAT GAAATAATGC TCAAGGACGT GAATGAGCGG CCTGCAATCA AACAGGAAAT TGAAAAATTG CGGAGCGATT ACCGCTCTGC CCTGGAGAGG CTTGAACAAC TGGAGCAGAC GGATCAGGGC AAACAATTGA TCGCCGGTGC CAAATCCGCT ATTGATAATG CCAAAAAGGC CAATAACGAC ATCATCGAGC TGAGTCTTGC CGGGAAAACC GATCAGGCTC TGATAGTTTA CAACAAGGAA GGCGCCCCCC TATCGCAAAA GATCGTGACG GCATTCAAGA ATATCGTGAA GTATCAGGAA GAGCGGATGG AGCTGCGCTA CGCTGAAGCG CTGAAAGCCT ACGGCACCTC CCGGGCCGTT GCACTCGGTG TTGCTTTCTG CGCAGCGATC ATCGGCATTC TTATCAGCCT GTTTGCGACC AGGAGCATTA CGCGTCCCCT CGACAAAGCC GTATCGGTAT CCAATGAACT GGCAGAGGGG AACCTGACCG TAACGATCGA AGCGACGAGC AAGGACGAGA CGGGTCAGCT GCTTGCGGCG ATGCACAACA TGGTAGAGAA GCTGAAGGGC GTGGTAGCTG ACGTGAAGAG CGCGGCGGAC AACGTTGCCG CCGGCAGCCA GGAGCTCTCC TCCAGCTCCG AGGAGATGAG CCAGGGAGCC ACCGAGCAGG CGGCCGCGGC CGAAGAGGCC TCCAGCTCCA TGGAGCAGAT GAGCTCCAAC ATCCGGCAGA ACGCTGACAA CGCCACCCAG ACCGAGAAGA TCGCCCTGAA GAGCGCCACG GATGCCCGCG AGGGTGGCAA GGCTGTTGCC GGCACGGTGA GTGCCATGAA GGAAATCGCC TCCAAGATCT CGATCATCGA GGAGATAGCC CGTCAGACGA ACCTGCTGGC GTTGAACGCA GCCATCGAAG CGGCGCGTGC CGGTGAGCAC GGCAAAGGGT TCGCGGTGGT AGCGGCCGAG GTCAGAAAGC TTGCCGAACG GAGCCAGAAG GCAGCGGGCG AGATCAGCGA GCTGTCTGCC TCCAGCGTTC AGGTAGCGGA AGAAGCCGGC GAGATGCTGA CGCGAATCGT GCCGGACATC CAGCGTACCG CGGAACTGGT GCAGGAGATC AGCGCCGCGT GCAAGGAGCA GGACACGGGA GCGGAGCAGA TCAACAAAGC TATCCAGCAG CTTGACCAGG TGATCCAGCA GAACGCCAGC GCCAGCGAAG AGATGGCGTC CACCAGCGAA GAGCTGGCCA GTCAGGCCGA ACAGCTGCAG GCCACCATTT CATTCTTCCG GACCGATGAT CGTGGCGCGT CAAGCCGGAG CGCGGTCCAT CGTCCCGTTG CCAAGAAAAA GGCAGCGATC CCTCATCTGG GTCACGGCAC GTCCAACGGC TACCACGCCG AACCCGCGAC GTCGCGGAAA GTGGCGGTGG GCGGCGGGGT AAACCTGAAC CTGGACAGCG ATCACCTTGA CGACCAGTTC GAGAAATTCT AG
|
Protein sequence | MRIGDLKIGV RLGIGFGVLL VLLGVVTVVG INGMKEINSK LDRILKVNYG KIKNANEVSM VVGDLMGKIN EIMLKDVNER PAIKQEIEKL RSDYRSALER LEQLEQTDQG KQLIAGAKSA IDNAKKANND IIELSLAGKT DQALIVYNKE GAPLSQKIVT AFKNIVKYQE ERMELRYAEA LKAYGTSRAV ALGVAFCAAI IGILISLFAT RSITRPLDKA VSVSNELAEG NLTVTIEATS KDETGQLLAA MHNMVEKLKG VVADVKSAAD NVAAGSQELS SSSEEMSQGA TEQAAAAEEA SSSMEQMSSN IRQNADNATQ TEKIALKSAT DAREGGKAVA GTVSAMKEIA SKISIIEEIA RQTNLLALNA AIEAARAGEH GKGFAVVAAE VRKLAERSQK AAGEISELSA SSVQVAEEAG EMLTRIVPDI QRTAELVQEI SAACKEQDTG AEQINKAIQQ LDQVIQQNAS ASEEMASTSE ELASQAEQLQ ATISFFRTDD RGASSRSAVH RPVAKKKAAI PHLGHGTSNG YHAEPATSRK VAVGGGVNLN LDSDHLDDQF EKF
|
| |