Gene GSU1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1300 
Symbol 
ID2688082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1421178 
End bp1422869 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content58% 
IMG OID637125974 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_952353 
Protein GI39996402 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCG GTGATCTCAA AATTGGCGTA CGGCTTGGTA TTGGATTTGG TGTTTTGCTC 
GTCCTACTGG GTGTCGTTAC CGTGGTCGGC ATCAATGGTA TGAAGGAGAT TAACTCAAAG
CTGGATCGCA TTCTCAAGGT CAACTATGGG AAGATCAAGA ATGCCAATGA AGTCTCTATG
GTCGTTGGCG ATTTGATGGG CAAGATCAAT GAAATAATGC TCAAGGACGT GAATGAGCGG
CCTGCAATCA AACAGGAAAT TGAAAAATTG CGGAGCGATT ACCGCTCTGC CCTGGAGAGG
CTTGAACAAC TGGAGCAGAC GGATCAGGGC AAACAATTGA TCGCCGGTGC CAAATCCGCT
ATTGATAATG CCAAAAAGGC CAATAACGAC ATCATCGAGC TGAGTCTTGC CGGGAAAACC
GATCAGGCTC TGATAGTTTA CAACAAGGAA GGCGCCCCCC TATCGCAAAA GATCGTGACG
GCATTCAAGA ATATCGTGAA GTATCAGGAA GAGCGGATGG AGCTGCGCTA CGCTGAAGCG
CTGAAAGCCT ACGGCACCTC CCGGGCCGTT GCACTCGGTG TTGCTTTCTG CGCAGCGATC
ATCGGCATTC TTATCAGCCT GTTTGCGACC AGGAGCATTA CGCGTCCCCT CGACAAAGCC
GTATCGGTAT CCAATGAACT GGCAGAGGGG AACCTGACCG TAACGATCGA AGCGACGAGC
AAGGACGAGA CGGGTCAGCT GCTTGCGGCG ATGCACAACA TGGTAGAGAA GCTGAAGGGC
GTGGTAGCTG ACGTGAAGAG CGCGGCGGAC AACGTTGCCG CCGGCAGCCA GGAGCTCTCC
TCCAGCTCCG AGGAGATGAG CCAGGGAGCC ACCGAGCAGG CGGCCGCGGC CGAAGAGGCC
TCCAGCTCCA TGGAGCAGAT GAGCTCCAAC ATCCGGCAGA ACGCTGACAA CGCCACCCAG
ACCGAGAAGA TCGCCCTGAA GAGCGCCACG GATGCCCGCG AGGGTGGCAA GGCTGTTGCC
GGCACGGTGA GTGCCATGAA GGAAATCGCC TCCAAGATCT CGATCATCGA GGAGATAGCC
CGTCAGACGA ACCTGCTGGC GTTGAACGCA GCCATCGAAG CGGCGCGTGC CGGTGAGCAC
GGCAAAGGGT TCGCGGTGGT AGCGGCCGAG GTCAGAAAGC TTGCCGAACG GAGCCAGAAG
GCAGCGGGCG AGATCAGCGA GCTGTCTGCC TCCAGCGTTC AGGTAGCGGA AGAAGCCGGC
GAGATGCTGA CGCGAATCGT GCCGGACATC CAGCGTACCG CGGAACTGGT GCAGGAGATC
AGCGCCGCGT GCAAGGAGCA GGACACGGGA GCGGAGCAGA TCAACAAAGC TATCCAGCAG
CTTGACCAGG TGATCCAGCA GAACGCCAGC GCCAGCGAAG AGATGGCGTC CACCAGCGAA
GAGCTGGCCA GTCAGGCCGA ACAGCTGCAG GCCACCATTT CATTCTTCCG GACCGATGAT
CGTGGCGCGT CAAGCCGGAG CGCGGTCCAT CGTCCCGTTG CCAAGAAAAA GGCAGCGATC
CCTCATCTGG GTCACGGCAC GTCCAACGGC TACCACGCCG AACCCGCGAC GTCGCGGAAA
GTGGCGGTGG GCGGCGGGGT AAACCTGAAC CTGGACAGCG ATCACCTTGA CGACCAGTTC
GAGAAATTCT AG
 
Protein sequence
MRIGDLKIGV RLGIGFGVLL VLLGVVTVVG INGMKEINSK LDRILKVNYG KIKNANEVSM 
VVGDLMGKIN EIMLKDVNER PAIKQEIEKL RSDYRSALER LEQLEQTDQG KQLIAGAKSA
IDNAKKANND IIELSLAGKT DQALIVYNKE GAPLSQKIVT AFKNIVKYQE ERMELRYAEA
LKAYGTSRAV ALGVAFCAAI IGILISLFAT RSITRPLDKA VSVSNELAEG NLTVTIEATS
KDETGQLLAA MHNMVEKLKG VVADVKSAAD NVAAGSQELS SSSEEMSQGA TEQAAAAEEA
SSSMEQMSSN IRQNADNATQ TEKIALKSAT DAREGGKAVA GTVSAMKEIA SKISIIEEIA
RQTNLLALNA AIEAARAGEH GKGFAVVAAE VRKLAERSQK AAGEISELSA SSVQVAEEAG
EMLTRIVPDI QRTAELVQEI SAACKEQDTG AEQINKAIQQ LDQVIQQNAS ASEEMASTSE
ELASQAEQLQ ATISFFRTDD RGASSRSAVH RPVAKKKAAI PHLGHGTSNG YHAEPATSRK
VAVGGGVNLN LDSDHLDDQF EKF