| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3708 |
|---|
| Symbol | mcpJ |
|---|
| ID | 3722198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | - |
|---|
| Start bp | 830552 |
|---|
| End bp | 832213 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640073382 |
|---|
| Product | methyl accepting chemotaxis protein |
|---|
| Protein accession | YP_355219 |
|---|
| Protein GI | 77465716 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA AGCTCAAGCT CGCCGCGACG TTCCTTGCGG TCTTTCTTCT CTCAGGCATC
GCCGGGCTGG TGGCGGTGCG GGATTTCAAT CACATCGACG CACAGCTCAC CGAGATGATC
GAGAACCAGG TCCAGAACAC GGTCAAGGTC CAGGAGCTGA ACTCCGCGCA GCTTCGGCTG
AAGGCGGCGA TCCGCGAACA TCTCATCACC CGCAACGAGG GGGCCATGCG CCGGCTCGAG
GACGAGATGG TCGAGGCGCG GGCGCAGCAG AAGGACGCCA TGGACGCGCT CGAGGCGGCG
AAACTGGACC CAGAGGGCCG CGCCCTGCTC GACGAATACA CGGCCCTGCG GAAGGGCATC
TCCGAGATCA ACAACAAGGC GATCGAATTC TCGAAGAAGA ACGATCTGGA AGGCGCGTCG
AACCTCCTGC TCGACCCGGA CTATCTGGCG ACCCAGAAGA AGCGCGAGGA GCTGGCCGCC
GCCATCGTCG CCCAGCAGCT CGAGGCGCTT GACGCGGCCG AGAGCGATGT CCAGGCGATC
ATGGACGAGG CGAAGAAGAT GCTGATCGGC CTCCTGGCGC TTGCGGGCGT GGTGGGGATT
GCGGCTGCCG TCTGGATCAC CATGAGCATT GCCGGGGGCC TGCGCCGGGC GCTCGATCTG
TCGAAACGCG TGGCGGCCGG CGACCTGAGC GCCCAGGCGG ATGCCCGCGG CCGCGACGAG
ATCGCCGAAC TTCTCAAGTC GAACAACCTC ATGGTGGAGA AGCTGCGCGA AGTGGTGGGC
GGCGTCTCGT CGGTGGCCCG TCAGGTCTCC TCGGGCAGCG GTGAGATGGC CGCGACCTCC
GAACAGCTGA GCCAGGGCGC GAGCGAGCAG GCTTCGGCCA CCGAAGAAGC CTCGGCCTCG
GTCGAGCAGA TGGCCGCGAA CATCAAGCAG GCCGCCGACA ACGCGATGCA GACCGAACGC
ATCGCCTCGA AGGCGGCAGA GGATGCCCGC GCCTCGGGGG CTGCCGTGGA AGAGGCGGTG
GGCGCCATGC GGTCGATCGC CGACAAGATC ATGATGGTGC AGGAAATCGC GCGCCAGACC
GACCTTCTCG CCCTCAATGC GGCCGTCGAG GCGGCGCGGG CGGGCGAGCA CGGGCGGGGC
TTCGCGGTCG TGGCCTCCGA AGTGCGCAAG CTGGCCGAAC GCAGCCAGGC CGCCGCGGCC
GAGATCTCGC AGCTCTCGGC GGGCACCGTC CGGGCGGCGA CCGGCGCCGG CGAGATGCTG
AACCAGCTCG TGCCCGACAT CGAGAACACC TCGCGGCTCG TGACCGACAT CTCGGTGGCC
TCGCGGGAAC TGGCAGCCGG GGCGCAGCAG GTGGCGACGG CGATCCAGCA GCTCGACAAG
GTGACCCAGC AGAACAGCTC GGCCTCCCAG CAGCTGGCCG GCGGCGCCAA CGAACTGTCG
GGCCAGGCGG AGCAGCTCGA GACGACCGTG TCCTTCTTCC GCCTCTCCGA GGCCGCCCCG
GCCCCTGCCG CGCCGCAGCT CCGCATCGTC GAGGGCGGGC GGAAGACCCC CGCCGCCGCG
GCGGCTCCGA GCCCCGCGAA GGTGACCCCG GGCGGGTTCA GCTTCAGCCT CGACGGGTCG
GACGACGATC TCGACCGGGC CTTCCAGCGT CAGGGCCGCT GA
|
|---|
| Protein sequence | MTIKLKLAAT FLAVFLLSGI AGLVAVRDFN HIDAQLTEMI ENQVQNTVKV QELNSAQLRL
KAAIREHLIT RNEGAMRRLE DEMVEARAQQ KDAMDALEAA KLDPEGRALL DEYTALRKGI
SEINNKAIEF SKKNDLEGAS NLLLDPDYLA TQKKREELAA AIVAQQLEAL DAAESDVQAI
MDEAKKMLIG LLALAGVVGI AAAVWITMSI AGGLRRALDL SKRVAAGDLS AQADARGRDE
IAELLKSNNL MVEKLREVVG GVSSVARQVS SGSGEMAATS EQLSQGASEQ ASATEEASAS
VEQMAANIKQ AADNAMQTER IASKAAEDAR ASGAAVEEAV GAMRSIADKI MMVQEIARQT
DLLALNAAVE AARAGEHGRG FAVVASEVRK LAERSQAAAA EISQLSAGTV RAATGAGEML
NQLVPDIENT SRLVTDISVA SRELAAGAQQ VATAIQQLDK VTQQNSSASQ QLAGGANELS
GQAEQLETTV SFFRLSEAAP APAAPQLRIV EGGRKTPAAA AAPSPAKVTP GGFSFSLDGS
DDDLDRAFQR QGR
|
|---|
| |