| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3251 |
|---|
| Symbol | |
|---|
| ID | 5086000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 119423 |
|---|
| End bp | 121081 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640484823 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169440 |
|---|
| Protein GI | 146279282 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.367816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.217501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAA AGATCAAGCT CGCCGCAGCG TTCCTTGCGG TTTTTGTGCT GGCGGGAGCA
GCTGGTGTGC TCGCCGTGCG CGGGTTCAAC TCGCTCGATG CGCAGCTCGA CGCCATGCTC
GACGGCACCG TTCACGCGGC GATCCAGGCC GATGCGCTCA ATGCCGCGCA GCTGCGGCTG
AAGGCGGCGA TCCGCGAGCA TCTCATCAGC CAGGACGCGG CCACCAAGAA GGCCCGCGAA
GAGGAGATGG CGGTCGCGCG CGCCGAGCAG AAGGAAGCGA TGACGGCGCT CGAGACGGCG
GCTCTCGCGC CCGCTCAGCG CGCGCTGCTC GATGAATACA GCTCGCTCCG CGAGGTGATC
TCGAAGGTGA ACAACGAAGC GGTCGAGTTC TCGAGCCGGA ACGATCTGGC CAATGCCAGC
AGGCTTCTGC TCGCGCCCGA CTATCTGGCG ATGCAGTCCA GGCGGGAAGG GCTGATTGCC
CAGCTTGTCG AGGCCGAGCA GAAGGAACTT GAGGCGTTGC GTCTGGAGGC GGACCGCCAT
ACGCGCGAGG CGCGCCAGAT GCTGATCGGC ATGTTCGCTC TGGCCGGTGT GGTCGGCACC
GCCGCGGCCG TCTGGATCAC GGTCTCGATC AGCCGCGGTC TGCGCAAGGC TCTCGATCTG
TCGCGGCGCG TGGCCGAGGG CGACCTGACC GAGATGGCCG ATGCCCGCGG CCGTGACGAG
ATTGCCGAAC TCCTCCGCTC GAACAATCTC ATGGTCGAAA AGCTGCGCGA GGTGGTGGGC
GGCGTCACGA CCGTGGCGCA GCAGGTCTCG TCCGGCAGCG GCGAGATGGC CTCGACCTCA
GAGCAACTCA GCCAGGGGGC GAGCGAGCAG GCTTCGGCCA CCGAGGAAGC CTCGGCTTCG
GTCGAGCAGA TGGCGGCGAA CATCAAGCAG GCCGCCGACA ATGCGAGTCA GACCGAGCGG
ATGGCGACCA AGGCCGCCGA AGACGCCCGC GCCTCGGGGC AGGCCGTGAC CGAGGCCGTG
GCCGCCATGC GCTCGATCGC CGACAAGATC CTCGTGGTTC AGGAAATCGC CCGCCAGACG
GACCTGCTGG CGCTGAACGC CGCGGTCGAG GCCGCGCGGG CGGGCGAGCA TGGCCGCGGG
TTCGCCGTCG TGGCCTCCGA AGTGCGCAAG CTCGCCGAGC GCAGCCAGAC CGCCGCGGCC
GAGATCTCGT CGCTTTCGAC GGGCACCGTC CGCGCCGCCA CGGGCGCGGG CGAGATGCTG
AACCAGCTTG TGCCCGACAT CGAACATACC TCGCGCCTCG TGACCGACAT CTCGGTGGCC
TCGCGTGAAC TGGCGGCCGG GGCCCAGCAG GTCGCGACGG CGATCCAGCA GCTCGACAAG
GTGACCCAGC AGAACAGCGC AGCCTCGCAA CAGCTTGCGG GTGGTGCTTC CGAACTGTCG
GGCCAGGCCG CGCGGCTCGA GGAGACGGTG CGTTTCTTCA CGTTGAACGA GCAGGCGCTG
GCCAGCGCCC CGGCGCCGCA GCTGCGGGTC GTGCAGGGCG GACGGGTGGA AGCCGCGGCC
GCGCCGCCCC AGCGCAAGGT GGCCTCGGGG GGCTTCAGTT TCAGCCTCGA CGGCACGGAC
GATGAGCTGG ACCGCGCCTT CCACCGTCAG GGCCAATAG
|
|---|
| Protein sequence | MTIKIKLAAA FLAVFVLAGA AGVLAVRGFN SLDAQLDAML DGTVHAAIQA DALNAAQLRL
KAAIREHLIS QDAATKKARE EEMAVARAEQ KEAMTALETA ALAPAQRALL DEYSSLREVI
SKVNNEAVEF SSRNDLANAS RLLLAPDYLA MQSRREGLIA QLVEAEQKEL EALRLEADRH
TREARQMLIG MFALAGVVGT AAAVWITVSI SRGLRKALDL SRRVAEGDLT EMADARGRDE
IAELLRSNNL MVEKLREVVG GVTTVAQQVS SGSGEMASTS EQLSQGASEQ ASATEEASAS
VEQMAANIKQ AADNASQTER MATKAAEDAR ASGQAVTEAV AAMRSIADKI LVVQEIARQT
DLLALNAAVE AARAGEHGRG FAVVASEVRK LAERSQTAAA EISSLSTGTV RAATGAGEML
NQLVPDIEHT SRLVTDISVA SRELAAGAQQ VATAIQQLDK VTQQNSAASQ QLAGGASELS
GQAARLEETV RFFTLNEQAL ASAPAPQLRV VQGGRVEAAA APPQRKVASG GFSFSLDGTD
DELDRAFHRQ GQ
|
|---|
| |