More than 300 homologs were found in PanDaTox collection
for query gene Rfer_0902 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  100 
 
 
550 aa  1094    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  50.72 
 
 
541 aa  475  1e-132  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  50.93 
 
 
547 aa  454  1.0000000000000001e-126  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  48.34 
 
 
551 aa  447  1.0000000000000001e-124  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
576 aa  442  1e-123  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  47.73 
 
 
551 aa  431  1e-119  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  51.56 
 
 
543 aa  422  1e-117  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  70.67 
 
 
772 aa  417  9.999999999999999e-116  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  48.48 
 
 
563 aa  398  1e-109  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  46.74 
 
 
555 aa  397  1e-109  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
581 aa  360  3e-98  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  43.82 
 
 
558 aa  359  9e-98  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  43.52 
 
 
568 aa  358  9.999999999999999e-98  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
566 aa  354  2.9999999999999997e-96  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
532 aa  353  4e-96  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  52.89 
 
 
676 aa  348  1e-94  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  50.9 
 
 
677 aa  344  2e-93  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_011891  A2cp1_1322  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
538 aa  338  9.999999999999999e-92  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1220  methyl-accepting chemotaxis sensory transducer  47.54 
 
 
538 aa  335  1e-90  Anaeromyxobacter sp. K  Bacteria  normal  0.307637  n/a   
 
 
-
 
NC_010717  PXO_04751  chemotaxis protein  61.85 
 
 
698 aa  333  6e-90  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0333  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  64.98 
 
 
720 aa  333  7.000000000000001e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  56.16 
 
 
690 aa  330  3e-89  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  42.67 
 
 
563 aa  328  2.0000000000000001e-88  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011891  A2cp1_3844  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
556 aa  325  1e-87  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.99 
 
 
1019 aa  324  2e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  54.01 
 
 
551 aa  323  3e-87  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  38.38 
 
 
554 aa  324  3e-87  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  40.91 
 
 
566 aa  322  8e-87  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2323  methyl-accepting chemotaxis protein  52.12 
 
 
646 aa  320  5e-86  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  55.78 
 
 
551 aa  320  5e-86  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3761  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
557 aa  320  5e-86  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  55.78 
 
 
550 aa  319  7e-86  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3704  methyl-accepting chemotaxis sensory transducer  41.68 
 
 
559 aa  319  7.999999999999999e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  51.89 
 
 
659 aa  318  1e-85  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  38.3 
 
 
569 aa  318  1e-85  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  56.01 
 
 
509 aa  318  2e-85  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  53.99 
 
 
597 aa  316  9e-85  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  52.55 
 
 
561 aa  315  9.999999999999999e-85  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  53.91 
 
 
554 aa  314  1.9999999999999998e-84  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.31 
 
 
890 aa  314  2.9999999999999996e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  53.49 
 
 
674 aa  314  2.9999999999999996e-84  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  50.95 
 
 
546 aa  311  2e-83  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
705 aa  310  4e-83  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
553 aa  308  1.0000000000000001e-82  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
553 aa  307  3e-82  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
553 aa  307  4.0000000000000004e-82  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3602  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
509 aa  307  4.0000000000000004e-82  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  53.8 
 
 
494 aa  306  5.0000000000000004e-82  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  41 
 
 
548 aa  306  6e-82  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  41.7 
 
 
569 aa  306  6e-82  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  44.86 
 
 
682 aa  304  2.0000000000000002e-81  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  53.45 
 
 
652 aa  305  2.0000000000000002e-81  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  38.68 
 
 
564 aa  303  4.0000000000000003e-81  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  39.86 
 
 
568 aa  302  1e-80  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  37.22 
 
 
551 aa  302  1e-80  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
621 aa  301  2e-80  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  48.78 
 
 
675 aa  300  4e-80  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
560 aa  300  5e-80  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  38.43 
 
 
586 aa  300  6e-80  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
559 aa  300  6e-80  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
563 aa  297  3e-79  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
569 aa  297  3e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
617 aa  297  4e-79  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
553 aa  296  8e-79  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  54.05 
 
 
727 aa  295  1e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
583 aa  293  4e-78  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
1500 aa  293  6e-78  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  51.28 
 
 
720 aa  292  9e-78  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_007760  Adeh_3513  methyl-accepting chemotaxis sensory transducer  54.14 
 
 
509 aa  291  2e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.150611  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
553 aa  291  3e-77  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
592 aa  291  3e-77  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  38.22 
 
 
553 aa  290  4e-77  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
511 aa  289  8e-77  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
608 aa  288  2e-76  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
969 aa  288  2e-76  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  54.01 
 
 
686 aa  286  8e-76  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
595 aa  285  1.0000000000000001e-75  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
578 aa  285  1.0000000000000001e-75  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_011145  AnaeK_2401  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
528 aa  285  1.0000000000000001e-75  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
580 aa  285  2.0000000000000002e-75  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
554 aa  283  5.000000000000001e-75  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  52.89 
 
 
780 aa  283  7.000000000000001e-75  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1627  methyl-accepting chemotaxis sensory transducer  56.61 
 
 
733 aa  282  1e-74  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.426202  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  51.56 
 
 
780 aa  282  1e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  35.95 
 
 
611 aa  282  1e-74  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
537 aa  282  1e-74  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
553 aa  281  3e-74  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  36.51 
 
 
551 aa  280  5e-74  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  44.29 
 
 
562 aa  279  9e-74  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  50.28 
 
 
727 aa  278  2e-73  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  50.88 
 
 
1049 aa  278  2e-73  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  48.68 
 
 
868 aa  276  1.0000000000000001e-72  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  34.98 
 
 
569 aa  275  2.0000000000000002e-72  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  51.92 
 
 
962 aa  274  3e-72  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  36.06 
 
 
586 aa  274  3e-72  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  50.59 
 
 
1048 aa  274  3e-72  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  35.14 
 
 
543 aa  273  5.000000000000001e-72  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0872  methyl-accepting chemotaxis sensory transducer  52.66 
 
 
685 aa  273  5.000000000000001e-72  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  55.71 
 
 
846 aa  272  1e-71  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  34.98 
 
 
552 aa  272  1e-71  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
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