More than 300 homologs were found in PanDaTox collection
for query gene Lcho_3799 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  100 
 
 
772 aa  1545    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
868 aa  567  1e-160  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
823 aa  434  1e-120  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  70.67 
 
 
550 aa  429  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
780 aa  423  1e-117  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  36.85 
 
 
780 aa  417  9.999999999999999e-116  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
969 aa  412  1e-113  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04751  chemotaxis protein  42.62 
 
 
698 aa  374  1e-102  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  60.17 
 
 
551 aa  372  1e-101  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  45.1 
 
 
735 aa  369  1e-101  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  36.2 
 
 
735 aa  369  1e-100  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  61.56 
 
 
551 aa  368  1e-100  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
1049 aa  365  2e-99  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
1048 aa  363  6e-99  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  72.66 
 
 
543 aa  351  3e-95  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
547 aa  344  4e-93  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  63.35 
 
 
541 aa  342  1e-92  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0333  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.03 
 
 
720 aa  336  9e-91  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  70.8 
 
 
555 aa  333  6e-90  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.76 
 
 
1019 aa  328  2.0000000000000001e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  45.5 
 
 
1500 aa  323  8e-87  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.84 
 
 
890 aa  318  2e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.53 
 
 
1088 aa  318  3e-85  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
1093 aa  311  2.9999999999999997e-83  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  45.99 
 
 
686 aa  311  4e-83  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.32 
 
 
1046 aa  308  4.0000000000000004e-82  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41 
 
 
1089 aa  305  2.0000000000000002e-81  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  57.09 
 
 
558 aa  300  8e-80  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  55.4 
 
 
532 aa  296  1e-78  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  29.9 
 
 
752 aa  296  1e-78  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
685 aa  295  2e-78  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  41.2 
 
 
727 aa  294  4e-78  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
846 aa  292  1e-77  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3844  methyl-accepting chemotaxis sensory transducer  55.75 
 
 
556 aa  291  2e-77  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3761  methyl-accepting chemotaxis sensory transducer  55.75 
 
 
557 aa  291  3e-77  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3704  methyl-accepting chemotaxis sensory transducer  60.71 
 
 
559 aa  291  3e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
733 aa  290  5.0000000000000004e-77  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  50 
 
 
727 aa  289  2e-76  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  55.34 
 
 
566 aa  287  5.999999999999999e-76  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  38.37 
 
 
905 aa  286  8e-76  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  41.72 
 
 
962 aa  285  2.0000000000000002e-75  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2323  methyl-accepting chemotaxis protein  52.17 
 
 
646 aa  285  2.0000000000000002e-75  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  49.26 
 
 
597 aa  285  2.0000000000000002e-75  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  56.36 
 
 
551 aa  284  5.000000000000001e-75  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  54.42 
 
 
561 aa  283  7.000000000000001e-75  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  52.08 
 
 
554 aa  283  9e-75  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
659 aa  282  1e-74  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  52.34 
 
 
576 aa  282  2e-74  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  58.5 
 
 
551 aa  282  2e-74  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  58.5 
 
 
550 aa  282  2e-74  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  54.42 
 
 
652 aa  281  3e-74  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011145  AnaeK_1220  methyl-accepting chemotaxis sensory transducer  53.72 
 
 
538 aa  281  4e-74  Anaeromyxobacter sp. K  Bacteria  normal  0.307637  n/a   
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  52.26 
 
 
674 aa  281  5e-74  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  29.21 
 
 
733 aa  280  6e-74  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  53.49 
 
 
720 aa  280  6e-74  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_011891  A2cp1_1322  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
538 aa  280  8e-74  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  57.36 
 
 
509 aa  278  2e-73  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
905 aa  278  3e-73  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  58.73 
 
 
677 aa  277  5e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  56.79 
 
 
690 aa  277  5e-73  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  41.45 
 
 
908 aa  277  6e-73  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3278  methyl-accepting chemotaxis sensory transducer  33.38 
 
 
880 aa  276  8e-73  Anaeromyxobacter sp. K  Bacteria  normal  0.0350486  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  54.2 
 
 
676 aa  276  1.0000000000000001e-72  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
608 aa  276  1.0000000000000001e-72  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_011146  Gbem_1826  methyl-accepting chemotaxis sensory transducer  37.94 
 
 
835 aa  275  2.0000000000000002e-72  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  37.32 
 
 
619 aa  275  3e-72  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  30.41 
 
 
740 aa  274  5.000000000000001e-72  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3602  methyl-accepting chemotaxis sensory transducer  57.54 
 
 
509 aa  274  5.000000000000001e-72  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  49.29 
 
 
621 aa  272  1e-71  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  49.43 
 
 
617 aa  273  1e-71  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_007796  Mhun_0008  methyl-accepting chemotaxis sensory transducer  36.76 
 
 
519 aa  272  2e-71  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
581 aa  270  8e-71  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2421  methyl-accepting chemotaxis sensory transducer  38.83 
 
 
816 aa  268  2.9999999999999995e-70  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  46.33 
 
 
675 aa  267  5e-70  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  56.18 
 
 
553 aa  267  5.999999999999999e-70  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  56.18 
 
 
553 aa  267  5.999999999999999e-70  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  55.68 
 
 
682 aa  266  1e-69  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  58.17 
 
 
553 aa  265  2e-69  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  28.87 
 
 
753 aa  265  3e-69  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0990  methyl-accepting chemotaxis sensory transducer  27.78 
 
 
824 aa  264  4e-69  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.256608 
 
 
-
 
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.34 
 
 
853 aa  264  4.999999999999999e-69  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  52.63 
 
 
566 aa  264  6e-69  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  53.38 
 
 
563 aa  263  8e-69  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  49.29 
 
 
568 aa  263  1e-68  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1627  methyl-accepting chemotaxis sensory transducer  52.8 
 
 
733 aa  263  1e-68  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.426202  n/a   
 
 
-
 
NC_007796  Mhun_0016  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.64 
 
 
1009 aa  262  2e-68  Methanospirillum hungatei JF-1  Archaea  normal  0.0724205  normal 
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
740 aa  261  3e-68  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1775  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.02 
 
 
937 aa  261  4e-68  Methanosphaerula palustris E1-9c  Archaea  normal  0.303689  normal 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  55.02 
 
 
494 aa  260  5.0000000000000005e-68  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
640 aa  259  1e-67  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
563 aa  259  2e-67  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007760  Adeh_3513  methyl-accepting chemotaxis sensory transducer  55.81 
 
 
509 aa  258  3e-67  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.150611  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  53.26 
 
 
554 aa  257  7e-67  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  32.17 
 
 
705 aa  256  9e-67  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_009712  Mboo_1248  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
981 aa  256  1.0000000000000001e-66  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.206477  normal 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  44.36 
 
 
640 aa  255  3e-66  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  42.82 
 
 
637 aa  254  6e-66  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  52.26 
 
 
705 aa  253  8.000000000000001e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  52.68 
 
 
568 aa  253  1e-65  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
600 aa  253  1e-65  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>