| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1209 |
|---|
| Symbol | |
|---|
| ID | 7173112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 1487506 |
|---|
| End bp | 1489485 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643539718 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002435628 |
|---|
| Protein GI | 218886307 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.261932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG CCAAAAAGCT GATTCTGGGT TTCGGCCTTG TGCTCGTGCT GCTGGTTGCC
ATGGGGGGCA TTTCCTACAA GGCCTTGTCG GACGCCACGT TAGGTTTCTC GGACTACCGG
CGCACGGCCC GCGGCTCGCT GATGAGCGGG GAAATCATGT CGAGCATGCT CCAGATGCGT
CTCGGCGTGC TCAGCTTCAT GAACACCTCG TCCGAGGCCG CGTTGCGTTC TTATGAGGAT
GCCCGCGCGG AACTGGCCAA GGGCCTGGAC GAGGCCGACA AGAACATGAA GAACCCGGCA
CGCCGCAAGC ATCTGGCCAC CGTGGCCGAG GCGCTTGCCC AGTACGCCGC TGGCGTCGAC
GAGTTGCACA AGTACGACCA GACGCGCCAG GACGAAATCC GCACCTTGAA CACCATGGGG
CCGCAACGCG TGCAGGCCCT TGCCCAACTG GCGGAAGCCG CCCAGCGCGA AGGCGACGTG
GTGGGGGCTG CCCGGGCCGA GGCGGTCATG CGGGCCATGC TGGAACTGCG CCTGGCCGTG
GTCAAGATGA TGGCCGACAC GGACGTGAAA TGGCTGGAAC AGGCCAAGCA GGAGGCCGTT
CTGGTTGGCG AGGCATTCAA CCGCCTGATC GCCGACGTGC GCAACCCGGT GCTGCGTGAC
AAGGCCCGGG AACTGTACCA GCAGCGCACC GACTATTTTT CGGCGTTCGA ACGCATGTCC
GCCGCGGCCC TGAAGCGCGA CGCGGTGTAC AACGAGCGCC TGGCCAAGCT GGGCCCGGCC
ATCGCCCAGG CGTGCGACGC CATCCAGAAC AGCTACGAGG CGGAACAGAA CGAGATCGGC
CCCCGCGTGC AGGCATCCAA CGATCAGGCG CAGATGCTCA CCGGCGTCAT TGCCCTTGTG
GCGGTACTGT CGGGCGTGAC CATCGCGTGG CTGCTGATCC GGGTGGTCAT GGCCCAGTTG
GGCGCAGACC CGGCCGCACT GGCCGCCGTG ACCCGGCGCA TCGCCGCGGG CGACCTGGAC
GTGTCGTTCA ATGCGGCCAG CGGCAAGCTG CGCGGCGTGT ACGCCGACAT GAAGGACATG
GTGGACGGCC TTGTCTCGGT GATCACCGAG GTGCGCTCCG GTGCCGAAAA CGTTGCCTCC
GGCAGCGAGG AGCTTTCCGC CTCGGCCGAA ACCCTGTCGC AGGGGGCCAC CGAGCAGGCG
GCGTCCATTG AGGAAATATC CTCGTCCATG GAAGAAATGG CGGCCAACAT CCGCCAGAAC
ATGGAAAACG CCCGCCAGAC GGAAACCATC GCCACGCAGG CAGCCACCGA CGCGGAAGGC
GGCGGCAAGG CCGTGGGCGA CACCGTGGGC GCCATGCGCG AGATAGCAGC CAAGATTTCC
ATCATCGAGG AAATCGCCCG GCAGACCAAT CTGCTGGCCC TGAACGCGGC CATCGAGGCT
GCCCGCGCCG GTGAACACGG CAAGGGGTTT GCCGTGGTGG CGGCGGAAGT GCGCAAGCTG
GCCGAGCGCA GCGGGCAGGC CGCCGCCGAG ATCAGCGAAC TGTCGTCCTC CAGCGTGGCC
GTGGCCGAGC ATGCCGGTGC AATGCTGACC AAGATGGTGC CGGGCATCCG CCGCACCGCC
GAACTGGTGC AGGAAATCGC CGCGGCCAGC AACGAGCAGA ACGTGGGCGC GGAACAGGTC
AACAAGGCCA TTGCCCAACT CGACCAGGTC ATCCAGCAGA ACGCTTCCGC CTCGGAAGAA
ATGGCGTCCA CGTCCGAAGA GCTGTCCAGC CAGGCCGAAC AGTTGCAGGC CACCGTCTCG
CGCTTCCGCG TGGCGGCGCT GGACGACGGC CTGGTGCGCA CCCCGCGCCG GGCACAGCCC
AAGGTGGCGC CCCGCGCCGT TGCGGGCCAG GCCCCGCGCA AGGCGGTGAC CGGCAAGGGC
GGGCACATCG CGCTGGACAT GGATGCCGAT GCGGATGACA GTGAGTTCGA GCGCTTCTAG
|
|---|
| Protein sequence | MTLAKKLILG FGLVLVLLVA MGGISYKALS DATLGFSDYR RTARGSLMSG EIMSSMLQMR
LGVLSFMNTS SEAALRSYED ARAELAKGLD EADKNMKNPA RRKHLATVAE ALAQYAAGVD
ELHKYDQTRQ DEIRTLNTMG PQRVQALAQL AEAAQREGDV VGAARAEAVM RAMLELRLAV
VKMMADTDVK WLEQAKQEAV LVGEAFNRLI ADVRNPVLRD KARELYQQRT DYFSAFERMS
AAALKRDAVY NERLAKLGPA IAQACDAIQN SYEAEQNEIG PRVQASNDQA QMLTGVIALV
AVLSGVTIAW LLIRVVMAQL GADPAALAAV TRRIAAGDLD VSFNAASGKL RGVYADMKDM
VDGLVSVITE VRSGAENVAS GSEELSASAE TLSQGATEQA ASIEEISSSM EEMAANIRQN
MENARQTETI ATQAATDAEG GGKAVGDTVG AMREIAAKIS IIEEIARQTN LLALNAAIEA
ARAGEHGKGF AVVAAEVRKL AERSGQAAAE ISELSSSSVA VAEHAGAMLT KMVPGIRRTA
ELVQEIAAAS NEQNVGAEQV NKAIAQLDQV IQQNASASEE MASTSEELSS QAEQLQATVS
RFRVAALDDG LVRTPRRAQP KVAPRAVAGQ APRKAVTGKG GHIALDMDAD ADDSEFERF
|
|---|
| |