More than 300 homologs were found in PanDaTox collection
for query gene PXO_00043 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_00046  chemotaxis protein  68.5 
 
 
753 aa  682    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  73 
 
 
752 aa  786    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  100 
 
 
705 aa  1420    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  66.9 
 
 
733 aa  704    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  68.87 
 
 
740 aa  636    Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  63.39 
 
 
755 aa  659    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  62.11 
 
 
745 aa  605  1.0000000000000001e-171  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  62.6 
 
 
843 aa  599  1e-170  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  64.94 
 
 
706 aa  557  1e-157  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  59.22 
 
 
691 aa  518  1.0000000000000001e-145  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  52.73 
 
 
797 aa  488  1e-136  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  55.2 
 
 
793 aa  484  1e-135  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  52.24 
 
 
707 aa  480  1e-134  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  66.24 
 
 
775 aa  461  9.999999999999999e-129  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  41.24 
 
 
792 aa  386  1e-106  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  45.23 
 
 
945 aa  370  1e-101  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  57.18 
 
 
679 aa  367  1e-100  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  54.04 
 
 
654 aa  364  4e-99  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  53.03 
 
 
656 aa  360  6e-98  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  53.03 
 
 
656 aa  360  6e-98  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  60.69 
 
 
679 aa  356  6.999999999999999e-97  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  51.77 
 
 
657 aa  355  2e-96  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  51.73 
 
 
664 aa  354  2.9999999999999997e-96  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52 
 
 
665 aa  353  5e-96  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  52.13 
 
 
664 aa  353  5e-96  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  63.4 
 
 
572 aa  351  2e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  62.34 
 
 
566 aa  352  2e-95  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.63 
 
 
1123 aa  349  8e-95  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  49.62 
 
 
767 aa  348  2e-94  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  49.24 
 
 
860 aa  348  2e-94  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  52.08 
 
 
863 aa  347  4e-94  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  66.56 
 
 
559 aa  346  8e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.34 
 
 
701 aa  346  1e-93  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  57.88 
 
 
562 aa  345  1e-93  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  51.53 
 
 
657 aa  345  1e-93  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  62.54 
 
 
542 aa  344  2.9999999999999997e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.63 
 
 
864 aa  344  4e-93  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  56.15 
 
 
557 aa  343  5e-93  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  64.83 
 
 
586 aa  343  5e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  56.15 
 
 
557 aa  343  5e-93  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  58.24 
 
 
779 aa  342  9e-93  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  56.15 
 
 
557 aa  342  1e-92  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  71.09 
 
 
592 aa  342  1e-92  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  57.54 
 
 
793 aa  341  2.9999999999999998e-92  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  62.87 
 
 
559 aa  340  4e-92  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  61.66 
 
 
583 aa  338  9.999999999999999e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  58.45 
 
 
569 aa  338  2.9999999999999997e-91  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  63.4 
 
 
580 aa  338  2.9999999999999997e-91  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  63.31 
 
 
598 aa  337  3.9999999999999995e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  57.26 
 
 
578 aa  336  1e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  54.38 
 
 
589 aa  335  2e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  59.83 
 
 
559 aa  334  3e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  57.83 
 
 
527 aa  334  4e-90  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  54.29 
 
 
579 aa  334  4e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  64.87 
 
 
680 aa  333  6e-90  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  62.5 
 
 
552 aa  333  6e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  61.03 
 
 
579 aa  333  7.000000000000001e-90  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  48.74 
 
 
678 aa  333  1e-89  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  62.03 
 
 
578 aa  332  2e-89  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  51.73 
 
 
610 aa  332  2e-89  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.52 
 
 
845 aa  332  2e-89  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  67.73 
 
 
601 aa  330  5.0000000000000004e-89  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  67.48 
 
 
617 aa  330  6e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  65.88 
 
 
522 aa  330  6e-89  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  65.88 
 
 
522 aa  330  6e-89  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  62.21 
 
 
584 aa  330  7e-89  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  63.32 
 
 
596 aa  329  8e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.48 
 
 
608 aa  329  9e-89  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  64.05 
 
 
561 aa  329  1.0000000000000001e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  61.26 
 
 
537 aa  328  2.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  54.16 
 
 
586 aa  328  2.0000000000000001e-88  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  63.64 
 
 
561 aa  328  2.0000000000000001e-88  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.48 
 
 
609 aa  328  2.0000000000000001e-88  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  58.44 
 
 
580 aa  328  3e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0231  methyl-accepting chemotaxis sensory transducer  63.75 
 
 
324 aa  327  5e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  55.26 
 
 
651 aa  327  6e-88  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.44 
 
 
515 aa  326  7e-88  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  65.54 
 
 
524 aa  326  9e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.38 
 
 
566 aa  326  1e-87  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  52.72 
 
 
579 aa  325  2e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  66.44 
 
 
515 aa  325  2e-87  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  60.18 
 
 
615 aa  324  3e-87  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  60.18 
 
 
615 aa  324  3e-87  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  53.67 
 
 
653 aa  324  4e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  72.16 
 
 
513 aa  323  6e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  56.67 
 
 
575 aa  323  6e-87  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  63.06 
 
 
618 aa  323  6e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
628 aa  322  9.999999999999999e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  56.06 
 
 
581 aa  322  1.9999999999999998e-86  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  71.76 
 
 
513 aa  322  1.9999999999999998e-86  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  71.76 
 
 
513 aa  322  1.9999999999999998e-86  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  53.67 
 
 
653 aa  322  1.9999999999999998e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5250  methyl-accepting chemotaxis protein, sensory transducer  65.94 
 
 
677 aa  322  1.9999999999999998e-86  Cupriavidus metallidurans CH34  Bacteria  normal  0.0837898  normal  0.0130353 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  70.04 
 
 
519 aa  321  1.9999999999999998e-86  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  58.53 
 
 
553 aa  322  1.9999999999999998e-86  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  58.24 
 
 
553 aa  321  3e-86  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  71.76 
 
 
576 aa  321  3e-86  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  58.24 
 
 
553 aa  321  3e-86  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  65.62 
 
 
556 aa  321  3e-86  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  60.68 
 
 
573 aa  321  3e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>