More than 300 homologs were found in PanDaTox collection
for query gene PXO_00045 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_00046  chemotaxis protein  57.66 
 
 
753 aa  709    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  55.62 
 
 
752 aa  666    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  100 
 
 
691 aa  1402    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  54.79 
 
 
733 aa  630  1e-179  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  63.88 
 
 
745 aa  572  1.0000000000000001e-162  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  50.31 
 
 
740 aa  522  1e-147  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  59.22 
 
 
705 aa  518  1.0000000000000001e-145  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  58.01 
 
 
755 aa  510  1e-143  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
843 aa  452  1e-125  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  80.99 
 
 
775 aa  436  1e-121  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  82.86 
 
 
797 aa  434  1e-120  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  53.51 
 
 
706 aa  423  1e-117  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  78.42 
 
 
793 aa  410  1e-113  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  45.44 
 
 
707 aa  360  5e-98  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  38.44 
 
 
792 aa  357  3.9999999999999996e-97  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  59.5 
 
 
542 aa  335  1e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  41.58 
 
 
945 aa  333  6e-90  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  67.82 
 
 
583 aa  330  6e-89  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  67.97 
 
 
592 aa  328  3e-88  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  73.26 
 
 
579 aa  323  6e-87  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  61.25 
 
 
596 aa  323  9.000000000000001e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  66.41 
 
 
598 aa  322  9.999999999999999e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  68.87 
 
 
584 aa  322  1.9999999999999998e-86  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
589 aa  322  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  62.86 
 
 
562 aa  322  1.9999999999999998e-86  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  63.57 
 
 
701 aa  321  3e-86  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  70.88 
 
 
559 aa  320  3.9999999999999996e-86  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  67.06 
 
 
580 aa  320  3.9999999999999996e-86  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  67.06 
 
 
578 aa  320  5e-86  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  59.64 
 
 
767 aa  319  9e-86  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  66.43 
 
 
586 aa  319  1e-85  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  69.14 
 
 
515 aa  318  2e-85  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  70.7 
 
 
513 aa  317  3e-85  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  70.7 
 
 
513 aa  317  3e-85  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  65.15 
 
 
552 aa  318  3e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  65.88 
 
 
580 aa  317  3e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  69.14 
 
 
515 aa  317  4e-85  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  62.91 
 
 
566 aa  317  5e-85  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  65.49 
 
 
579 aa  317  6e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  61.43 
 
 
845 aa  315  9.999999999999999e-85  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  64.23 
 
 
573 aa  315  9.999999999999999e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  70.31 
 
 
513 aa  315  1.9999999999999998e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  74.51 
 
 
559 aa  315  1.9999999999999998e-84  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  70.98 
 
 
572 aa  314  2.9999999999999996e-84  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  63.67 
 
 
779 aa  314  2.9999999999999996e-84  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  60.14 
 
 
557 aa  313  4.999999999999999e-84  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  60.14 
 
 
557 aa  313  4.999999999999999e-84  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  69.65 
 
 
559 aa  313  5.999999999999999e-84  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  63.67 
 
 
793 aa  313  5.999999999999999e-84  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  59.8 
 
 
557 aa  312  1e-83  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  67.16 
 
 
575 aa  312  1e-83  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  65.06 
 
 
557 aa  311  2e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  63.64 
 
 
579 aa  311  2.9999999999999997e-83  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  65.1 
 
 
515 aa  310  4e-83  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  70.7 
 
 
515 aa  310  5e-83  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  66.17 
 
 
576 aa  310  5e-83  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  64.36 
 
 
569 aa  310  5.9999999999999995e-83  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  72.16 
 
 
680 aa  310  8e-83  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  61.23 
 
 
578 aa  310  8e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  64.34 
 
 
537 aa  309  1.0000000000000001e-82  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.87 
 
 
566 aa  309  1.0000000000000001e-82  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  62.73 
 
 
586 aa  308  2.0000000000000002e-82  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  69.41 
 
 
551 aa  308  2.0000000000000002e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  70.77 
 
 
577 aa  308  2.0000000000000002e-82  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  65.89 
 
 
527 aa  308  2.0000000000000002e-82  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  60.7 
 
 
585 aa  307  4.0000000000000004e-82  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  70.2 
 
 
524 aa  307  5.0000000000000004e-82  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  65.76 
 
 
659 aa  307  5.0000000000000004e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  69.35 
 
 
617 aa  306  6e-82  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  66.02 
 
 
585 aa  306  7e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  69.53 
 
 
522 aa  306  7e-82  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  69.53 
 
 
522 aa  306  7e-82  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  58.5 
 
 
630 aa  306  7e-82  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  64.09 
 
 
535 aa  306  9.000000000000001e-82  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  67.31 
 
 
608 aa  306  9.000000000000001e-82  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  70.66 
 
 
634 aa  305  1.0000000000000001e-81  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  70.66 
 
 
634 aa  305  1.0000000000000001e-81  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  61.13 
 
 
539 aa  306  1.0000000000000001e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  69.41 
 
 
600 aa  305  2.0000000000000002e-81  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  67.57 
 
 
615 aa  305  2.0000000000000002e-81  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  60.71 
 
 
591 aa  305  2.0000000000000002e-81  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  61.45 
 
 
591 aa  305  2.0000000000000002e-81  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  67.57 
 
 
615 aa  305  2.0000000000000002e-81  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  63.57 
 
 
679 aa  305  3.0000000000000004e-81  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  62.06 
 
 
618 aa  304  3.0000000000000004e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  58.5 
 
 
628 aa  304  4.0000000000000003e-81  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.97 
 
 
609 aa  303  5.000000000000001e-81  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  67.32 
 
 
587 aa  303  5.000000000000001e-81  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0231  methyl-accepting chemotaxis sensory transducer  69.49 
 
 
324 aa  303  5.000000000000001e-81  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  67.43 
 
 
601 aa  303  6.000000000000001e-81  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.97 
 
 
608 aa  303  6.000000000000001e-81  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  66.79 
 
 
589 aa  303  6.000000000000001e-81  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  64.06 
 
 
653 aa  302  1e-80  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  62.71 
 
 
608 aa  302  1e-80  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  62.71 
 
 
608 aa  302  1e-80  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  62.92 
 
 
532 aa  302  1e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  62.37 
 
 
508 aa  302  1e-80  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  64.06 
 
 
653 aa  302  1e-80  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  66.93 
 
 
585 aa  303  1e-80  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  58.6 
 
 
679 aa  302  2e-80  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
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