Gene PXO_00045 details

Gene Information

• Locus tag: PXO_00045
• ID: 6305306
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 1823507
• End bp: 1825582
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642639077
• Product: chemotaxis protein
• Protein accession: YP_001912950
• Protein GI: 188576021
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.505093
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCACCC GCCTTTCCGC CGCGTTCGGC TTCCTGATCC TGCTGTCTTG CGGCCTGGTG 
GTCGCTGGCC TGATGACCCT GGCGCAAGCG CGCGGGCGTA TGGACTCGAT CGTCAAACAC 
AATATGGCGA TCCTCGAATA TATCGGCGAG ATGCGCAGCG CAAGTTCAGC AATTGCGATC 
AACCTGCGCA ATATCGTCAT GCCAACCACG CAGGAAGAAA ACCTCGGTTT TGCCAAGGTG 
ATCGAGGAAC AGCGGCAGTA CTACAAGCAA AACCGCGCCA AACTTTTCGC ACGCCCGCCG 
TCCAACGCCG CCGGTGCGCA GATGCGCAAG CAGATTGATA TTGCGCGCGA AAAAGCCCGT 
ATCGCCAATC AGCAGGTGAT GGACCTGGGC TTGAGCGACA AGCCCGATGA GGCACTCAAG 
GTGTTGATGC AGCAGGCAGC ACCGGCGAAC CAGCAATGGC AGGCCGCACT CGATGCGTAC 
GCTGCGCGCC AGCGTACCCT TGGCACAGCG GCCTGTGACG ACGCGAATAC CGCGATGGAT 
CATGGCCGGG CATTGCTGAT CGCTGGCGGC ATTGCGGTGA TTTTGGTGAG TGGCCTGCTG 
GACTGGCTGA TCACCCGCAG CCTGACCCAC CCCTTGAACC GTGCCACCCG TGCCGCCGAG 
GCCATCGCCG AGGGCCGCCT GGATAGCAAC GTGCACACCA CCGCCACCGA CGAGCCGGGA 
CGCTTGCTCA GCGCCATGGC CAAGATGCAG GCGCAGTTGC AGCGTTTCTC CAGCGAGACC 
ACGCGGATGA TCGAGCTGCA CGCCGACAAG GACATGACGC ACCGCATGCC GCAGGACTTC 
CCCGGCGTGT ACGGCGACCT GAGCAATGGC ATCAACACCA TGATGTTCGA GCACCTGGAC 
GCCATCGTCG ATGCGATCGA AGTGCTCAAC GAATACGCCC GCGGCGACCT GCGCCGCGAT 
GCACGCCGCC TGCCGGGTAG CCGCGCGGTG CTGCACCAAT CGATAGATGC GCGCAAGTCC 
AGCCCTGCTG GCGATCAATA CCGAGATCAA GCGACTGGCC AGCACGGCCG CGGCTGGCGA 
CTTCAGCGCA CGCGGCGATG CGCAACGGTT CGAGCACGAC TTCCTGCGCA TGGTGCAGGA 
CATCAATGCA ATGATGGAAG TCAGCGACAC CAGCTTGAGC ACGTTGTCGG CGCTACTGCC 
CGCATGAACG GTCATTTCCA CGGTGTGTTC GCCACGATGC GCGACGACGC CAACGCCACC 
ACAGAACAGC TCACACGCAT CGTCATGCGG ATCCAGAGCG TGGCGAGCAA CATCAGCGCA 
GCCACTGGCG AAATCGCCGC CGGCAACCAG GATCTGCCGC AACGCACAGA GCAACAAGCT 
GCCAATCTCG AAGAAACCGC TGCCTCGATG GAAGAACTCA CCTCCACCGT CAAGCAGAAC 
GCCCAAAGCG CACGCCAGGC CAATCAGCTC GCCATCGGTG CGGCCAAGGT GGCCTCGCAG 
GGCGGCGAGA TCGCCAGCAA AGTGGTCGAC ACCATGCGCG GAATCGAGCC TTCGTCCAAG 
AAGATCGCCG ACATCATCAG CGTCATCGAT GGCATCGCCT TCCAGACCAA CATCCTGGCC 
TTGAATGCCG CGGTGGAAGC CGCGCGCGCC GGCGAACAAG GCCGCGGCTT CGCGGTAGTC 
GCCTCGGAAG TCCGCACGCT GGCACAGCGC TCCTCGGGCG CCGCCAAGGA AATCAAGGAC 
CTCATCGACG ACTCGGTGCA ACGCGTGGCC GAAGGCTCGC TGCTGGTGCA CAGCGCCGGC 
ACCACCATGG CCGAGATCGT GGCCAGCGTG CAGCGTGTGA CCGGCATCAT GGGCGAGATC 
TCCGCCGCCT CGCAGGAGCA GTCCTCGGGC ATCGAACAGG TCAACCAGAC GGTGACCCAG 
ATGGACGAGA CCACCCAGCA GAACGCAGCG CTGGTGGAAG AAGCCACTGC GGCGGCCCGA 
TCAATGGAAG AACAGGCGCA GCAATTGCGC GATGCGGTCT CCGTGTTCCA GCTGCAAGCC 
GATATGGCGC GCAGCGGCCT GGGTCGCGCT GCCTGA 

 

Protein sequence

MGTRLSAAFG FLILLSCGLV VAGLMTLAQA RGRMDSIVKH NMAILEYIGE MRSASSAIAI 
NLRNIVMPTT QEENLGFAKV IEEQRQYYKQ NRAKLFARPP SNAAGAQMRK QIDIAREKAR 
IANQQVMDLG LSDKPDEALK VLMQQAAPAN QQWQAALDAY AARQRTLGTA ACDDANTAMD 
HGRALLIAGG IAVILVSGLL DWLITRSLTH PLNRATRAAE AIAEGRLDSN VHTTATDEPG 
RLLSAMAKMQ AQLQRFSSET TRMIELHADK DMTHRMPQDF PGVYGDLSNG INTMMFEHLD 
AIVDAIEVLN EYARGDLRRD ARRLPGSRAV LHQSIDARKS SPAGDQYRDQ ATGQHGRGWR 
LQRTRRCATV RARLPAHGAG HQCNDGSQRH QLEHVVGATA RMNGHFHGVF ATMRDDANAT 
TEQLTRIVMR IQSVASNISA ATGEIAAGNQ DLPQRTEQQA ANLEETAASM EELTSTVKQN 
AQSARQANQL AIGAAKVASQ GGEIASKVVD TMRGIEPSSK KIADIISVID GIAFQTNILA 
LNAAVEAARA GEQGRGFAVV ASEVRTLAQR SSGAAKEIKD LIDDSVQRVA EGSLLVHSAG 
TTMAEIVASV QRVTGIMGEI SAASQEQSSG IEQVNQTVTQ MDETTQQNAA LVEEATAAAR 
SMEEQAQQLR DAVSVFQLQA DMARSGLGRA A