| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00054 |
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| Symbol | |
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| ID | 6305296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1810082 |
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| End bp | 1812475 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642639067 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001912940 |
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| Protein GI | 188576011 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.276697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATGGA TCAACAATCT GAAATTGATG CCCAAGCTGA TGCTGGCGTT CGGCATCGTG
CTGCTGATCA TGCTCGTCCA GGGCATCATC GCCTATTCGG GCCTGGCCTC GCTCAATAAC
GTCACCCGCG ATCTGGCCGG CAATACCATG TCCAGCGTGC GCGAGGCAGG CGATCTGCGC
GGTATGCTCG GCGAATACCG CAACGCGGCT TACCAGAACC TGGTGCGCGC CAGCGATTCG
GTCAAGCAGG AAGCCAAGGT TCGCTCCAAC AAGCTCAACG GCAAGATCGA AGCCACCATC
AAGGGCTACC CGCGCCTGAT CGAGAGCCCG CAGCAGAAGA AGCTGTTCGA CGTGTTCGTG
GCCGACTGGA AGAAGGCTTC GGCCTCCTAC GCCAGCGTCG CTGAAATGAT CGAACTCAAT
CTGCCCGACG ATGCCGTCGA CACCTTCGTC GGTGAAACCC GCACCCTGCA CAACAAGGCC
AAGGATTCGC TGGCTGCGTT GATCGCCGAA GACAACATGC TCGCGCAGGC TGCCAAGACC
AAGGCCGAAA AGGTCCACGC CACCTCCGTC TCGCTGACCG TGATGGTGCT GCTGATCGGC
ATTGCCGGCG GCCTGGGCCT GGCGTTCCTG TTTGCCCGTT CCATCGTCAA GAGCATGCGC
GGCGCGGTCA CCGCCGCCAC CGAAATCGCC GGCGGCAAGC TGGACGGCCA GATCAACGTG
CAGGGCCAGG ACGAAGTGGG CGAATTGATG CGCTCCATGC AGCGCATGCA GCGCATGCAG
CGCGACCTGA AAGAGCGCAT CGAACGCGAC CAGAGGATTG CCGACGAAAA CCTGCGCATT
CGTACTGCGT TGGACACGTC CTCGACCGGC ACCTTCATCA CCGATCCCGA GCGCGTCATG
ATTTACGCCA ACGACGCCTT CAAGAAGATC GTGGCGCAGT ACGAAAGCAG CATCCGCCTG
GCATCGCCCG AATTCGACGC CAGCAAGGTC ATCGGCCAGC ACATCAGCTA CCTGGGTCTG
TCGGATGCGA CCGTGCGCAA GGCCATTGCC GCATTGGAAC GCGTTGGTGT CACCAGCTTC
GAAGAGCGCT TCGGCGAAGT GGTGCTGGCA CAGACAGTCA CCGCCATCAA GAACGAACAG
TGCGAGACCA GCGGCGAAGT CTGCGAATGG CGCGACCGCA CCATCGAAGT CCAGGTCGAA
GAAGAAGTTG CGCGTATCGT GCGTGACGCT GCCAGCGGCG ACATGAGCGG CAGCGTGGAA
ACCGACGGCA AGCAGGGTTT CTTCCTGCAG CTGGCGCAGC AGCTCAACGG CTTGCTGGAT
GCCAATGCCG GCAGCCTGGA GCATATCTCG GCCCTGTTGT CCGCGCTGTC GCGTGGCGAC
CTGACCGTGC GCATGCATGG CGAGTTCAGC GGCGTGTTCG CGCAGATGCG TGACGATGCC
AATGCCACCG CCGAGCAGCT GGCCGACATC GTTGGCCACA TCAAGCTGTC GTCCGGTGCG
ATCAACGCAG CCGCTGGCGA AATTGCTTCG GGCAACAGCG ACCTGTCGCA TCGCACCGAG
CAGCAGGCCG CCAACCTGGA AGAAACCGCC GCCTCGATGG AGGAGCTCAC CTCCACCGTC
AAGCAGAACG CCGAGAGCGC CCGTCAGGCC AACCAGCTTG CCATCGGCGC CACCGGCGTG
GCCTCGCAAG GCGGTGAAGT GGTGTCGCAG GTGGTCACCA CCATGTCCGG CATCGAAGCC
TCGTCCAGGA AGATCGCCGA CATCATCAGC GTCATCGATG GCATCGCGTT CCAGACCAAT
ATCTTGGCGC TGAATGCAGC GGTGGAAGCG ACACGTGCCG GCGAGCAGGG TCGCGGCTTT
GCCGTGGTCG CCTCCGAAGT GCGTACGCTG GCACAGCGTT CGGCCGGTGC GGCTAAGGAG
ATCAAGGGGT TGATCGACGA TTCCGTGCAC AAGGTGGCCG AAGGCTCGGC ACTGGTCCGC
AAGGCCGGTG CCACCATGGC CGAGATCGTG GCCAGCGTGC AGCGCGTGAC CGACATCATG
GGGGAGATTT CTGCGGCTTC GCAGGAGCAG TCGTCCGGGA TCGAGCAGGT CAACCAGACC
ATCACCCAGA TGGACGAAAC CACCCAGCAG AATGCTGCGC TGGTGGAAGA AGCCACCGCC
GCCGCCCGTT CGATGGAAGA GCAGGCCGGT CACCTGGCCG AAGCGGTGTC GGTGTTCAAA
CTGGACGAAT CGGCTGCGCC GGTTGCGCAG ACCGCACGCG TGCGGCCGAT CGCCTCGCGC
CCGGTTGCAG TGAAAGGCGC CGCCGCCAAG CCGCTAGCGC GGGCAGCGGC CACCGCGGCG
CGGCCTGCCA CATCCCAGGC CGCGTTGGCC GACGGTCACT GGCAAGAGTT CTGA
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| Protein sequence | MQWINNLKLM PKLMLAFGIV LLIMLVQGII AYSGLASLNN VTRDLAGNTM SSVREAGDLR
GMLGEYRNAA YQNLVRASDS VKQEAKVRSN KLNGKIEATI KGYPRLIESP QQKKLFDVFV
ADWKKASASY ASVAEMIELN LPDDAVDTFV GETRTLHNKA KDSLAALIAE DNMLAQAAKT
KAEKVHATSV SLTVMVLLIG IAGGLGLAFL FARSIVKSMR GAVTAATEIA GGKLDGQINV
QGQDEVGELM RSMQRMQRMQ RDLKERIERD QRIADENLRI RTALDTSSTG TFITDPERVM
IYANDAFKKI VAQYESSIRL ASPEFDASKV IGQHISYLGL SDATVRKAIA ALERVGVTSF
EERFGEVVLA QTVTAIKNEQ CETSGEVCEW RDRTIEVQVE EEVARIVRDA ASGDMSGSVE
TDGKQGFFLQ LAQQLNGLLD ANAGSLEHIS ALLSALSRGD LTVRMHGEFS GVFAQMRDDA
NATAEQLADI VGHIKLSSGA INAAAGEIAS GNSDLSHRTE QQAANLEETA ASMEELTSTV
KQNAESARQA NQLAIGATGV ASQGGEVVSQ VVTTMSGIEA SSRKIADIIS VIDGIAFQTN
ILALNAAVEA TRAGEQGRGF AVVASEVRTL AQRSAGAAKE IKGLIDDSVH KVAEGSALVR
KAGATMAEIV ASVQRVTDIM GEISAASQEQ SSGIEQVNQT ITQMDETTQQ NAALVEEATA
AARSMEEQAG HLAEAVSVFK LDESAAPVAQ TARVRPIASR PVAVKGAAAK PLARAAATAA
RPATSQAALA DGHWQEF
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