| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3105 |
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| Symbol | |
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| ID | 3965505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3966012 |
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| End bp | 3968315 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922202 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_528574 |
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| Protein GI | 90022747 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT TGTTTGAGTT GTTTGGCGGT GGTCACAGCC GGCAGGAAAA AGAGTTAGAA
GATAAAGTAA ATGCGGCAAG AAGTGCTTTG GCCGTAATTG AATTTACGCC AGAAGGTGTT
GTAGAAACCG CAAACGATCT GTTTTTAAAT GCGATGGGCT ACAGCTTAAA TGAAATTCAA
GGTAAGCACC ATTCAATATT CGTTACAGAT GAATATAGAA ATAGCAACGA TTACAAGAAT
TTTTGGAGTA ATTTACGCCG TGGCGAAAGT CTGTCGGGCG AAATAGAGCG GGTTACAAGC
AATGGTGAAT CTGTTTTGCT ACATGCGACT TATAGCCCTC TCCTCGACGA GGATGGCTCA
GTATATCGCG TAATAAAATT CGCGACGGAT ATTACTGAAG TTCGCCGAGA GTCCAATCAG
GCTAGCGCAC TTAAATTGTG TCAGGCAAAT GTGATGCTTG CCGATAATGA ACTGAATATT
GTTTATATGA ACGATACAGT AGTAGAAATG CTACAAGAGC GCGAAAAGGA ATTGCAGCAA
CACCTGCCTA GCTTCAAAGT AAAAGATTTA ATTGGCACCA ACGTTGATAC TTTTCATAAA
AGCCCAGAGC ATCAACGCAA TCTGCTAAGA GAACTTAAAA CACCCTACAA AACAACATTA
AACATAGGCG ATATGGTGTT CGGCTTGATT GCCACGCCCT GGTTTAATAG CAATGGTGAG
CGGTTAGGCA CACTTGTAGA GTGGCTTGAT AAAACCGAAG AAGTGAAAAA ACAAAACGAA
TTGGCGGCGA TAGCGGCAGA GAATGCACGT GTACGCTACG CGCTAGATAG CGTCACCGCA
AATGTCATGA TTGCCGACCC TGAAGGCAAT ATTTTATATA TGAACGAATC TGTAAACGGC
ATGTTCAAAA ATGCAGAATC GGATATTAAA CGCGACCTCC CCAATTTTGA TAGCCGCACA
TTGGTGGGAA CCAATATGGA TGTATTCCAT AAAAACCCTG CGCATCAACG CAATCTATTG
AATAACCTCA CCAGCACGTA TAACGGCGGT GCAAAGGTGG GCGGTAGATC ATTCACTGTT
ATTGCAAACC CCATTTTTGT AGATGGAAAG AAAATTGGCG CTGTTGTGGA ATGGGCCGAT
CGCACCGCTG AAGTGGCAAT AGAGAAAGAA ATAGACGAAA TGGTGGCGGC CGCGTCTCAG
GGTGATTTTA CTAAACAAAT TTCACTGGAT GGCAAGAACG GTTTCTTCTT AGGGTTAGCG
AAAGGCCTGA ATGATTTGGT CACTACAGTT GAAGTGGCGC TGAATGATAT TTCGCGTGTG
CTTGGCTCTA TGGCGCGTGG CGTGTTAACA GAGCGTATTA CCCGCAATTA CGACGGATCT
TTTGGCGAAT TAAAAGAAAA CGCCAACGGT ACCATCGAAA AACTTACCGA TATTATTGGC
AAAATTCGAA CTGCCTCAAA TGCAATAAGC ACAGCGGCTA ATGAAATTGC ACAGGGCAAC
GCCGATTTAA GTCAGCGCAC AGAAGAGCAA GCTTCTTCAC TAGAAGAAAC CGCCTCTAGT
ATGGAAGAAA TGACCTCTAC CGTAAGGCAA AGCGCCGAAA ACGCACAACA GGCTAATACC
CTAGCTATGT CTGCTCAGAA AAAAGCAGGT GAAGGTGGTC AGGTAGTCTC TAAAGCTGTT
GAGGCAATGG GTGCAATAAG CGAATCCAGT AAAAAAATTA ACGACATTAT CGGCGTAATC
GACGAAATCG CCTTCCAAAC TAACTTGCTC GCCCTTAACG CCGCAGTAGA AGCCGCGCGC
GCAGGTGAAC AAGGGCGAGG TTTTGCGGTA GTGGCAGGTG AAGTACGAAA CCTTGCTCAG
CGCTCAGCCG CTGCGGCGAA AGAAATTAAA GAGCTTATTC GCGATAGTGT TTCTAAGGTG
GAGGATGGCA CAGTGCTGGT CAATCGCTCT GGTGAAACCC TAGAAGAGCT GGTGTCGTCG
GTAGAAACCG TAAGTAATAT GATGCAGGAA ATAAGCAATG GCGCAACCGA GCAAACCTCG
GGTATTGAGC AAGTAAACAC TGCAATTTCG CAAATGGATG AAATGACGCA ACAGAACGCA
GCACTCGTAG AGGAAGCATC GGCCGCAGGT GAGGCCATGG CAGAGCAAGC AGCGCGGCTA
ATGGAAGAGG TGTCGTTTTT CACTATATCG CAAAATCAAC AACACATGGT CGTTAGTGCT
AGTGCTCGCC CAGCGAAAAA GAGCGTTTCT ACTCGCGCCT CTAGCGCACC CAGCGTTTCA
GATGACGACT GGGAAGACTT TTAA
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| Protein sequence | MKKLFELFGG GHSRQEKELE DKVNAARSAL AVIEFTPEGV VETANDLFLN AMGYSLNEIQ
GKHHSIFVTD EYRNSNDYKN FWSNLRRGES LSGEIERVTS NGESVLLHAT YSPLLDEDGS
VYRVIKFATD ITEVRRESNQ ASALKLCQAN VMLADNELNI VYMNDTVVEM LQEREKELQQ
HLPSFKVKDL IGTNVDTFHK SPEHQRNLLR ELKTPYKTTL NIGDMVFGLI ATPWFNSNGE
RLGTLVEWLD KTEEVKKQNE LAAIAAENAR VRYALDSVTA NVMIADPEGN ILYMNESVNG
MFKNAESDIK RDLPNFDSRT LVGTNMDVFH KNPAHQRNLL NNLTSTYNGG AKVGGRSFTV
IANPIFVDGK KIGAVVEWAD RTAEVAIEKE IDEMVAAASQ GDFTKQISLD GKNGFFLGLA
KGLNDLVTTV EVALNDISRV LGSMARGVLT ERITRNYDGS FGELKENANG TIEKLTDIIG
KIRTASNAIS TAANEIAQGN ADLSQRTEEQ ASSLEETASS MEEMTSTVRQ SAENAQQANT
LAMSAQKKAG EGGQVVSKAV EAMGAISESS KKINDIIGVI DEIAFQTNLL ALNAAVEAAR
AGEQGRGFAV VAGEVRNLAQ RSAAAAKEIK ELIRDSVSKV EDGTVLVNRS GETLEELVSS
VETVSNMMQE ISNGATEQTS GIEQVNTAIS QMDEMTQQNA ALVEEASAAG EAMAEQAARL
MEEVSFFTIS QNQQHMVVSA SARPAKKSVS TRASSAPSVS DDDWEDF
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