More than 300 homologs were found in PanDaTox collection
for query gene RS03153 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  100 
 
 
524 aa  1038    Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  86.59 
 
 
522 aa  861    Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  86.59 
 
 
522 aa  861    Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  58.3 
 
 
615 aa  479  1e-134  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  58.3 
 
 
615 aa  479  1e-134  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  57.06 
 
 
600 aa  467  9.999999999999999e-131  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  56.54 
 
 
608 aa  465  1e-129  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  75.61 
 
 
515 aa  426  1e-118  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  54.32 
 
 
608 aa  426  1e-118  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  54.32 
 
 
608 aa  426  1e-118  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  50 
 
 
572 aa  422  1e-117  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  49.72 
 
 
617 aa  422  1e-117  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  75.3 
 
 
515 aa  424  1e-117  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  77.29 
 
 
515 aa  421  1e-116  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  52.72 
 
 
515 aa  417  9.999999999999999e-116  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  50.86 
 
 
570 aa  418  9.999999999999999e-116  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  51.78 
 
 
597 aa  415  9.999999999999999e-116  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  54.88 
 
 
605 aa  416  9.999999999999999e-116  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  82.93 
 
 
513 aa  414  1e-114  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  82.52 
 
 
513 aa  413  1e-114  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  49.44 
 
 
618 aa  414  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  82.52 
 
 
513 aa  413  1e-114  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  49.42 
 
 
579 aa  405  1e-111  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
648 aa  399  9.999999999999999e-111  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  73.98 
 
 
634 aa  395  1e-109  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  73.98 
 
 
634 aa  395  1e-109  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  48.76 
 
 
655 aa  397  1e-109  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  48.83 
 
 
589 aa  396  1e-109  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  48.95 
 
 
648 aa  397  1e-109  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
659 aa  396  1e-109  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_009076  BURPS1106A_3934  methyl-accepting chemotaxis protein  49.14 
 
 
673 aa  391  1e-107  Burkholderia pseudomallei 1106a  Bacteria  normal  0.3175  n/a   
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  48.95 
 
 
673 aa  390  1e-107  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  48.95 
 
 
671 aa  389  1e-107  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3433  putative methyl-accepting chemotaxis protein  48.76 
 
 
673 aa  387  1e-106  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  50.59 
 
 
513 aa  387  1e-106  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_006348  BMA2857  methyl-accepting chemotaxis protein, putative  48.76 
 
 
673 aa  387  1e-106  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3118  putative methyl-accepting chemotaxis protein  48.76 
 
 
673 aa  388  1e-106  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0285227  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  46.23 
 
 
535 aa  386  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A1686  putative methyl-accepting chemotaxis protein  48.76 
 
 
673 aa  388  1e-106  Burkholderia mallei NCTC 10229  Bacteria  normal  0.303273  n/a   
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  48.37 
 
 
659 aa  386  1e-106  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  48.37 
 
 
659 aa  386  1e-106  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  69.82 
 
 
551 aa  383  1e-105  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  48.18 
 
 
657 aa  384  1e-105  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  46.82 
 
 
596 aa  384  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  64.86 
 
 
559 aa  380  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  45.75 
 
 
516 aa  381  1e-104  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
549 aa  381  1e-104  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  67.08 
 
 
513 aa  378  1e-103  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3180  methyl-accepting chemotaxis protein, putative  48.18 
 
 
666 aa  377  1e-103  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  70.39 
 
 
513 aa  377  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  75.17 
 
 
617 aa  372  1e-102  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  64.42 
 
 
583 aa  373  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  47.51 
 
 
549 aa  375  1e-102  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  63.07 
 
 
588 aa  372  1e-102  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  63.81 
 
 
594 aa  369  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0345  methyl-accepting chemotaxis sensory transducer  47.04 
 
 
547 aa  370  1e-101  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  48.04 
 
 
513 aa  370  1e-101  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.69 
 
 
609 aa  369  1e-101  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.69 
 
 
608 aa  369  1e-101  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  49.63 
 
 
613 aa  370  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  66.77 
 
 
585 aa  366  1e-100  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  48.16 
 
 
541 aa  367  1e-100  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  69.26 
 
 
577 aa  366  1e-100  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  49.89 
 
 
566 aa  368  1e-100  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  48.58 
 
 
601 aa  367  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  66.26 
 
 
559 aa  366  1e-100  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  50.23 
 
 
562 aa  365  2e-99  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  59.24 
 
 
569 aa  364  3e-99  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  57.22 
 
 
578 aa  362  7.0000000000000005e-99  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  62.83 
 
 
576 aa  360  3e-98  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.41 
 
 
566 aa  359  5e-98  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  66.46 
 
 
587 aa  358  9e-98  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  63.55 
 
 
552 aa  358  9.999999999999999e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  56.76 
 
 
580 aa  357  1.9999999999999998e-97  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  65.34 
 
 
586 aa  357  2.9999999999999997e-97  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007435  BURPS1710b_A2534  methyl-accepting chemotaxis protein  49.13 
 
 
518 aa  356  5e-97  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1358  methyl-accepting chemotaxis protein  49.13 
 
 
518 aa  356  5e-97  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1280  methyl-accepting chemotaxis protein  49.13 
 
 
518 aa  356  5e-97  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  52.39 
 
 
589 aa  356  5.999999999999999e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  49.36 
 
 
556 aa  356  5.999999999999999e-97  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  44.34 
 
 
543 aa  354  2.9999999999999997e-96  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  68.3 
 
 
584 aa  353  2.9999999999999997e-96  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  65.14 
 
 
680 aa  353  2.9999999999999997e-96  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  60.79 
 
 
580 aa  354  2.9999999999999997e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  55.68 
 
 
542 aa  353  4e-96  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2470  methyl-accepting chemotaxis protein  49.9 
 
 
616 aa  353  5e-96  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  65.54 
 
 
705 aa  353  5e-96  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  63.66 
 
 
585 aa  353  5.9999999999999994e-96  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010515  Bcenmc03_5635  methyl-accepting chemotaxis sensory transducer  47.79 
 
 
519 aa  352  5.9999999999999994e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.264146  normal  0.57201 
 
 
-
 
NC_010625  Bphy_5591  methyl-accepting chemotaxis sensory transducer  46.04 
 
 
519 aa  353  5.9999999999999994e-96  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1464  methyl-accepting chemotaxis protein  49.13 
 
 
518 aa  352  7e-96  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.25 
 
 
584 aa  352  7e-96  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
539 aa  352  8.999999999999999e-96  Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_007347  Reut_A2020  histidine kinase, HAMP region: chemotaxis sensory transducer  46.55 
 
 
521 aa  352  1e-95  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1158  methyl-accepting chemotaxis sensory transducer  47.6 
 
 
519 aa  352  1e-95  Burkholderia sp. 383  Bacteria  normal  normal  0.220586 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  59.39 
 
 
537 aa  351  1e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  59.56 
 
 
587 aa  352  1e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  44.82 
 
 
567 aa  351  1e-95  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  65.14 
 
 
598 aa  352  1e-95  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_008543  Bcen2424_4665  methyl-accepting chemotaxis sensory transducer  47.6 
 
 
519 aa  351  2e-95  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0344145  normal  0.449012 
 
 
-
 
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