More than 300 homologs were found in PanDaTox collection
for query gene Gbem_1044 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  94.69 
 
 
584 aa  1063    Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  64.74 
 
 
587 aa  695    Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  66.78 
 
 
585 aa  733    Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  100 
 
 
584 aa  1174    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.06 
 
 
566 aa  496  1e-139  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  51.38 
 
 
541 aa  471  1.0000000000000001e-131  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  58.92 
 
 
513 aa  446  1.0000000000000001e-124  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  49.21 
 
 
519 aa  447  1.0000000000000001e-124  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.92 
 
 
513 aa  446  1.0000000000000001e-124  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  54.7 
 
 
513 aa  444  1e-123  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  49.81 
 
 
515 aa  443  1e-123  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.62 
 
 
515 aa  442  9.999999999999999e-123  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.06 
 
 
618 aa  439  9.999999999999999e-123  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  49.22 
 
 
585 aa  441  9.999999999999999e-123  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  50.53 
 
 
519 aa  440  9.999999999999999e-123  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  48.86 
 
 
621 aa  442  9.999999999999999e-123  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  51.17 
 
 
515 aa  436  1e-121  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  48.82 
 
 
519 aa  437  1e-121  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  48.16 
 
 
598 aa  432  1e-120  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.58 
 
 
564 aa  431  1e-119  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  53.07 
 
 
629 aa  426  1e-118  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
611 aa  425  1e-118  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
627 aa  426  1e-118  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  53.5 
 
 
513 aa  425  1e-117  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  50 
 
 
546 aa  419  9.999999999999999e-116  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  52.89 
 
 
511 aa  416  9.999999999999999e-116  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  50.91 
 
 
526 aa  417  9.999999999999999e-116  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  52.89 
 
 
512 aa  419  9.999999999999999e-116  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  52.99 
 
 
517 aa  417  9.999999999999999e-116  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  50 
 
 
546 aa  417  9.999999999999999e-116  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  50 
 
 
546 aa  419  9.999999999999999e-116  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  50 
 
 
546 aa  419  9.999999999999999e-116  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  50 
 
 
546 aa  419  9.999999999999999e-116  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  52.99 
 
 
517 aa  416  9.999999999999999e-116  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  54.63 
 
 
464 aa  414  1e-114  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
513 aa  415  1e-114  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
513 aa  412  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  49.5 
 
 
518 aa  413  1e-114  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  54.12 
 
 
517 aa  411  1e-113  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
520 aa  408  1.0000000000000001e-112  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  53.71 
 
 
517 aa  406  1.0000000000000001e-112  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
544 aa  407  1.0000000000000001e-112  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  48.76 
 
 
521 aa  406  1.0000000000000001e-112  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  52.14 
 
 
482 aa  402  1e-111  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
521 aa  405  1e-111  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  49.4 
 
 
542 aa  400  9.999999999999999e-111  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  52.03 
 
 
541 aa  402  9.999999999999999e-111  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  53.71 
 
 
517 aa  400  9.999999999999999e-111  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
517 aa  401  9.999999999999999e-111  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  52.03 
 
 
541 aa  402  9.999999999999999e-111  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  48.12 
 
 
549 aa  397  1e-109  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  46.47 
 
 
518 aa  398  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  53.48 
 
 
517 aa  397  1e-109  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
583 aa  396  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
545 aa  396  1e-109  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  49.25 
 
 
515 aa  395  1e-109  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
545 aa  397  1e-109  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
545 aa  397  1e-109  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.71 
 
 
579 aa  392  1e-108  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  60.82 
 
 
572 aa  395  1e-108  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  56.69 
 
 
569 aa  393  1e-108  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
598 aa  391  1e-107  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.1 
 
 
519 aa  385  1e-106  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.05 
 
 
512 aa  387  1e-106  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
678 aa  385  1e-106  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.14 
 
 
519 aa  380  1e-104  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  59.89 
 
 
542 aa  381  1e-104  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.8 
 
 
532 aa  380  1e-104  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  47.25 
 
 
519 aa  381  1e-104  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  64.04 
 
 
586 aa  377  1e-103  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  66.98 
 
 
559 aa  376  1e-103  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  47.22 
 
 
542 aa  378  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  62.13 
 
 
559 aa  375  1e-103  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  62.94 
 
 
513 aa  376  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
520 aa  377  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  55.67 
 
 
579 aa  372  1e-102  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  59.61 
 
 
552 aa  375  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
563 aa  374  1e-102  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  67.88 
 
 
577 aa  374  1e-102  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  57.65 
 
 
578 aa  375  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  50.11 
 
 
650 aa  372  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  66.88 
 
 
592 aa  370  1e-101  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  38.39 
 
 
549 aa  366  1e-100  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  57.89 
 
 
543 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  68.42 
 
 
615 aa  365  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  68.42 
 
 
615 aa  365  1e-100  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  60.98 
 
 
596 aa  366  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  57.26 
 
 
553 aa  367  1e-100  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  60 
 
 
733 aa  368  1e-100  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  64.17 
 
 
548 aa  368  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  63.06 
 
 
598 aa  366  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  64.54 
 
 
580 aa  365  2e-99  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  65.58 
 
 
600 aa  364  3e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  50.12 
 
 
554 aa  363  4e-99  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  61.61 
 
 
537 aa  363  5.0000000000000005e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  54 
 
 
589 aa  363  6e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  68.71 
 
 
608 aa  362  8e-99  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  68.71 
 
 
608 aa  362  8e-99  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  57.84 
 
 
752 aa  362  1e-98  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  46.92 
 
 
514 aa  362  1e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
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