More than 300 homologs were found in PanDaTox collection
for query gene Vapar_4188 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  63.93 
 
 
541 aa  641    Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
566 aa  1134    Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.19 
 
 
564 aa  580  1e-164  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  57.37 
 
 
585 aa  534  1e-150  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  52.59 
 
 
587 aa  522  1e-147  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.77 
 
 
584 aa  508  1e-143  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  55.28 
 
 
584 aa  509  1e-143  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  52.92 
 
 
519 aa  499  1e-140  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  52.13 
 
 
585 aa  494  9.999999999999999e-139  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.8 
 
 
618 aa  485  1e-136  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  51.55 
 
 
621 aa  486  1e-136  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  51.89 
 
 
629 aa  481  1e-134  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  54.14 
 
 
513 aa  481  1e-134  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  50.78 
 
 
519 aa  481  1e-134  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  53.91 
 
 
515 aa  477  1e-133  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  52.54 
 
 
515 aa  473  1e-132  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  51.08 
 
 
519 aa  473  1e-132  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  51.84 
 
 
518 aa  469  1.0000000000000001e-131  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.34 
 
 
515 aa  471  1.0000000000000001e-131  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.99 
 
 
513 aa  470  1.0000000000000001e-131  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  52.99 
 
 
513 aa  470  1.0000000000000001e-131  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  51.55 
 
 
515 aa  469  1.0000000000000001e-131  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  52.22 
 
 
627 aa  467  9.999999999999999e-131  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  92.01 
 
 
577 aa  463  1e-129  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  49.71 
 
 
513 aa  459  9.999999999999999e-129  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  50.57 
 
 
611 aa  459  9.999999999999999e-129  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  50.39 
 
 
513 aa  458  1e-127  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  51.96 
 
 
546 aa  453  1.0000000000000001e-126  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  51.96 
 
 
546 aa  453  1.0000000000000001e-126  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
542 aa  454  1.0000000000000001e-126  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  51.96 
 
 
546 aa  454  1.0000000000000001e-126  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  53.02 
 
 
526 aa  452  1.0000000000000001e-126  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  51.96 
 
 
546 aa  453  1.0000000000000001e-126  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
518 aa  452  1.0000000000000001e-126  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  51.96 
 
 
546 aa  453  1.0000000000000001e-126  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  52.25 
 
 
544 aa  452  1e-125  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  54.24 
 
 
512 aa  449  1e-125  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  52.05 
 
 
521 aa  451  1e-125  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.89 
 
 
519 aa  450  1e-125  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  52.25 
 
 
521 aa  451  1e-125  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  51.21 
 
 
545 aa  450  1e-125  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  53.77 
 
 
511 aa  448  1.0000000000000001e-124  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
520 aa  446  1.0000000000000001e-124  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  50.57 
 
 
598 aa  448  1.0000000000000001e-124  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  49.22 
 
 
517 aa  446  1.0000000000000001e-124  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  50.84 
 
 
545 aa  447  1.0000000000000001e-124  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  50 
 
 
517 aa  447  1.0000000000000001e-124  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  50.84 
 
 
545 aa  447  1.0000000000000001e-124  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  49.22 
 
 
517 aa  446  1.0000000000000001e-124  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.34 
 
 
519 aa  442  1e-123  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  71.21 
 
 
559 aa  443  1e-123  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
517 aa  442  1e-123  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
517 aa  442  1e-123  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  49.81 
 
 
517 aa  445  1e-123  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  48.34 
 
 
513 aa  443  1e-123  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
517 aa  443  1e-123  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.79 
 
 
579 aa  441  9.999999999999999e-123  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
541 aa  439  9.999999999999999e-123  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
541 aa  439  9.999999999999999e-123  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  51.86 
 
 
549 aa  441  9.999999999999999e-123  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  44.97 
 
 
598 aa  441  9.999999999999999e-123  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  52.72 
 
 
464 aa  437  1e-121  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  76.32 
 
 
579 aa  431  1e-119  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
514 aa  429  1e-119  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.39 
 
 
517 aa  429  1e-119  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
545 aa  429  1e-119  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  51.75 
 
 
520 aa  430  1e-119  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  50.62 
 
 
482 aa  428  1e-118  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  67.89 
 
 
559 aa  424  1e-117  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  45.84 
 
 
544 aa  424  1e-117  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  46.67 
 
 
678 aa  420  1e-116  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  49.05 
 
 
542 aa  417  9.999999999999999e-116  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  80.12 
 
 
516 aa  418  9.999999999999999e-116  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  66.57 
 
 
559 aa  413  1e-114  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.33 
 
 
532 aa  412  1e-114  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
519 aa  414  1e-114  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  55.66 
 
 
579 aa  410  1e-113  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  59.27 
 
 
589 aa  411  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  84.32 
 
 
680 aa  409  1.0000000000000001e-112  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  44.85 
 
 
521 aa  407  1.0000000000000001e-112  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  45.77 
 
 
485 aa  405  1.0000000000000001e-112  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  44.85 
 
 
521 aa  407  1.0000000000000001e-112  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  44.85 
 
 
521 aa  407  1.0000000000000001e-112  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.42 
 
 
512 aa  406  1.0000000000000001e-112  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  45.77 
 
 
485 aa  405  1.0000000000000001e-112  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  45.89 
 
 
524 aa  400  9.999999999999999e-111  Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  68.61 
 
 
597 aa  400  9.999999999999999e-111  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  54.52 
 
 
583 aa  396  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  68.51 
 
 
572 aa  395  1e-108  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
518 aa  394  1e-108  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.16 
 
 
529 aa  394  1e-108  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  46.81 
 
 
456 aa  391  1e-107  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1029  methyl-accepting chemotaxis protein  63.77 
 
 
562 aa  389  1e-107  Burkholderia pseudomallei 1710b  Bacteria  normal  0.815966  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  61.46 
 
 
569 aa  389  1e-107  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4331  methyl-accepting chemotaxis sensory transducer  46.14 
 
 
534 aa  391  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.555356 
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  63.48 
 
 
562 aa  388  1e-106  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
NC_006349  BMAA0152  methyl-accepting chemotaxis protein  64.46 
 
 
565 aa  384  1e-105  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  63.37 
 
 
586 aa  383  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  60.34 
 
 
579 aa  385  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_008784  BMASAVP1_1321  methyl-accepting chemotaxis protein  64.46 
 
 
565 aa  384  1e-105  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
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