| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3031 |
|---|
| Symbol | |
|---|
| ID | 8117008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3453682 |
|---|
| End bp | 3455271 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644853408 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
|---|
| Protein accession | YP_003005332 |
|---|
| Protein GI | 251790611 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT CTCTTGCCAG GAAGCTTTGG CTTCCACTTA TTATTAGTTT GCTATGTTTG
GCCGGAACCC TGATTTATGG ATCGGTAAAA ATTAAACAAG ATCAAATATC ACTAAGAGAA
ATGGAGTTAA TGCATGTGAC TCAGTTAGCA TTGGGGATTG TCAAAACCAA TGCTGAGTTA
GCCAGTAGCG GTGCGATTTC TTTAGCAGAG GCGCAACAAC GCGCCATGAA AGGAATAAAG
GATTTACGTT ATGGTGATTC AGGGTACTTC ACCATCATTA ATTCCCAGCC TCGGGTTTTA
ATGCATCCGA TTAATGAAGC GCTTATTGGT AGGGGGGGTG ATCTTAAGGA TGCTAATGGC
GTTTTTATTT ATCAAGATAT GGTGGGGGTT ACAAAAAAGA ATCAGTCCGG TTATACCTCT
TACGCGTTTC CTCGACCTGG TTCTACCGTT GCTCTACCTA AAACGGCCTA TAATTTACTC
TATGCACCCT GGGATTGGAT AATTACCACC GGGCTTTATA TCGATGATAT TAATGAGGCG
TTTATTCATT CACTCTATCA AAATGGCATC GTATTCATAT TAATTAGTGT ACTGCTTTCA
TTATTGGTCT ATTGGATTAA TCGCAGTATC TTGCGTATTT TAGGGGGAGA ACCCTCTTAT
GCAGCGGAGG TCGCCGCACG TATTGCCGCA GGCGATTTAT CTTATCCCGT CAGGACATTA
CCCAGTGATA ATGTCAGCTT ACTGCATGAA ATGGAGATGA TGCGGAAGCA GTTGATTACC
GTCATTGAGG ATATCCGTGC TGGCGCGGAA GTGATTGATG CCAGTAGTGG TGAAGTGAGC
GCCGGGAATA ACGACTTGTC ATCTTATACC GAGAGCCAAG CCGCTGCGTT GGAAAAAACC
TCCGCCAGTA TGGAGGAAAT TACCTCTACG GTTAAATTAA ATGCTGATAA TACGGAGCAA
GCTCGCCAGT TAGCCCGTTC TGCGCTGGAG ATCGCTTCCC GCGGCGGGGC AGTGATGCGG
GAAGTGAACG ATACCATGGG GGGGATTTCT GAAAGCTCCG ACAAGATAGC CAATATCACC
GAAGTGGTGA ATAACATTGC ATTTCAGACC AATATCCTTG CCCTGAACGC AGCGGTCGAA
GCGGCGCGAG CCGGTGAGCA AGGCCGTGGC TTTGCGGTCG TCGCGGGAGA GGTTCGGAGC
CTGGCGTTGC GCAGCTCACA AGCGGCGGGA GAAATAAAGA GCCTGATAGA AGAGTCGGTT
ACTCGCGTTA ATAGTGGATC AGAGAAGATA AAAATGGCCG ACAGCAGCAT CAAGGATGTG
CTTGATGCGG TACAACATGT TGCCGATATT GTGTCCGAGA TTGCCACGGC AACCAGTGAA
CAGGGTAAAG GCATCAGTTA TATCAATGAG TCAATTGTTC AAATTGATTC GATCACCCAG
CAGAATACGG CTCTGGCGAA ACGGGCCGTC GCCGCAGTAA ATGAGCTGGA ATTACAGGCC
CAACGATTGA AAGCATCGGT GGCGTATTTT AATACCGACG GTGCAGGCTA TCGTCATGAT
GTATTAGCGA TTGGTCGCGC TATATCGTGA
|
|---|
| Protein sequence | MKISLARKLW LPLIISLLCL AGTLIYGSVK IKQDQISLRE MELMHVTQLA LGIVKTNAEL
ASSGAISLAE AQQRAMKGIK DLRYGDSGYF TIINSQPRVL MHPINEALIG RGGDLKDANG
VFIYQDMVGV TKKNQSGYTS YAFPRPGSTV ALPKTAYNLL YAPWDWIITT GLYIDDINEA
FIHSLYQNGI VFILISVLLS LLVYWINRSI LRILGGEPSY AAEVAARIAA GDLSYPVRTL
PSDNVSLLHE MEMMRKQLIT VIEDIRAGAE VIDASSGEVS AGNNDLSSYT ESQAAALEKT
SASMEEITST VKLNADNTEQ ARQLARSALE IASRGGAVMR EVNDTMGGIS ESSDKIANIT
EVVNNIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRS LALRSSQAAG EIKSLIEESV
TRVNSGSEKI KMADSSIKDV LDAVQHVADI VSEIATATSE QGKGISYINE SIVQIDSITQ
QNTALAKRAV AAVNELELQA QRLKASVAYF NTDGAGYRHD VLAIGRAIS
|
|---|
| |