| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5380 |
|---|
| Symbol | |
|---|
| ID | 6246865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2521449 |
|---|
| End bp | 2523023 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642597101 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001861504 |
|---|
| Protein GI | 186474162 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.653994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.987419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGC TGAGTTTTAC GCAGAAGTTG TGGTTGCCGC TCGTCGTCAG CCTGATCGCG
TTGTTGCTGG TATCGGTGTC GGCGGCGTAT CTGTCGCGCG AGACGCGCAT CGAGGAGCGC
AAGAATGACC TCGTGAACGT TGCGCATGTC GGCTTGTCGC TGGTTCAGGA ATACGCGGCG
CTCGCGCAAA GCGGCAAGCT CAGCGACGCG GATGCACGCA AGGAGGCGCT CGCCCGCTTG
CACGACATCC GCTACGGCGA GGACGGCTAC TTCCTCGTGA TCGATTCGAC GCCGCGCATG
GTCATGCATC CCATCAAGCC CGCGACGAAC GGCAAGGATC TCGCCGGCAC GGCCGACGCC
GACGGACGCC ATCACTACGT GACATTCGCG AAAGTCGCGC AGTCGGCCGA TGGCGGCTTC
GTCGACTACG TGTTTCCGCA TTCGCGCGCC GCGTCCGCGT CGGGCCCCGC TGAAGCTGTC
GGCAAGATCG GGTATGTGGT GCGCTACGCG CCGTGGGACT GGATCATCGC GACGGGCGCG
TATGTCGACG ATATCGACGC CGCGTTCATG CGCTCGCTCT ATCTGATCGG CGGCGTGTTC
ATCGGCATTG CGCTGCTGCT GGCCGCGCTC GTCGCGGTGA CCAACCGTAG CATCCAGCGC
ACGATCGGCG GCGACCCCGT CTATGCCGCC GACGTCGCAA ATGCGATCGC GATCGGCGAT
CTGACCGTGT CTATCGATAC GCGCGAGAAC GACGAGCGCA GTCTGCTGCG CGAAATGCGC
CGCATGCGCG ACACGCTGAC GGACACCATC CGCGCAATCA AGCACGCCGC CGATAACGTC
GCGACGGGCG CGGGGGAAAT TGCCAGCGGC AATGCGGACC TCTCGTCGCG CACCGAGAAT
CAGGCCGCCT CGTTGCAGGA GACGGCCGCC AGCATGGAGC AGATGACGTC GATGGTCCGG
CAGACGGCCG AAAACGCGCG CACCGCGAGC GAACTCGCCG AAAGCGCCGC GCAGATCGCG
AACCAGGGCA GCGTGATGGT CGGCGAGGCC GTCTCGACGA TGCGCGACAT CTCCAGCGAA
TCGCAGAAGA TGGTCGAAGT GATTGCGGTG ATCGAAAGCA TCGCCTTCCA GACCAACATC
CTCGCGCTGA ATGCCGCCGT CGAAGCGGCG CGCGCGGGAG AACAGGGACG CGGCTTTGCC
GTCGTCGCGG GCGAAGTGCG CACGCTTGCG CATCGCAGCG CGGGCGCTGC CAAGGAAGTG
CGTCAACTGA TCAGCCGCGC CGTCGACAAG GTCGGCAACG GCGCGGGCCT CGTCGAGCGC
ACGGGATCGA CGATTCAGCA GGCACGCGAC GCGATTGCGA GCGTGACGGG CGTGATGCAG
GAAATCGCCG CGGCTGCCGC CGAACAGAGC GCGGGCATTG ATCAGGTCAA CCTGGCCGTT
ACGCAGATGG ACAGCCTCAC GCAGGAAAAT GCCGCGCTCG TCGAACAGGC GGCGGCCGCC
GCGCATTCGC TGACGGAACA GGCGGGTCGG CTGAAGACTT CGGTTGACGC GTTTCAGGTG
GCGGAAACCG TCTGA
|
|---|
| Protein sequence | MVKLSFTQKL WLPLVVSLIA LLLVSVSAAY LSRETRIEER KNDLVNVAHV GLSLVQEYAA
LAQSGKLSDA DARKEALARL HDIRYGEDGY FLVIDSTPRM VMHPIKPATN GKDLAGTADA
DGRHHYVTFA KVAQSADGGF VDYVFPHSRA ASASGPAEAV GKIGYVVRYA PWDWIIATGA
YVDDIDAAFM RSLYLIGGVF IGIALLLAAL VAVTNRSIQR TIGGDPVYAA DVANAIAIGD
LTVSIDTREN DERSLLREMR RMRDTLTDTI RAIKHAADNV ATGAGEIASG NADLSSRTEN
QAASLQETAA SMEQMTSMVR QTAENARTAS ELAESAAQIA NQGSVMVGEA VSTMRDISSE
SQKMVEVIAV IESIAFQTNI LALNAAVEAA RAGEQGRGFA VVAGEVRTLA HRSAGAAKEV
RQLISRAVDK VGNGAGLVER TGSTIQQARD AIASVTGVMQ EIAAAAAEQS AGIDQVNLAV
TQMDSLTQEN AALVEQAAAA AHSLTEQAGR LKTSVDAFQV AETV
|
|---|
| |