More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5935 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  74.76 
 
 
520 aa  749    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  100 
 
 
520 aa  1035    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.85 
 
 
515 aa  570  1e-161  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  59.85 
 
 
515 aa  570  1e-161  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  60.27 
 
 
546 aa  566  1e-160  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  60.27 
 
 
546 aa  566  1e-160  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  60.27 
 
 
546 aa  566  1e-160  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  60.74 
 
 
627 aa  568  1e-160  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  60.27 
 
 
546 aa  566  1e-160  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  60.27 
 
 
546 aa  567  1e-160  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  60.31 
 
 
611 aa  560  1e-158  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  59.19 
 
 
544 aa  555  1e-156  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  58.91 
 
 
515 aa  548  1e-154  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  58.61 
 
 
521 aa  546  1e-154  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  58.61 
 
 
521 aa  546  1e-154  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  59.19 
 
 
545 aa  544  1e-153  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  59.19 
 
 
545 aa  542  1e-153  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  59.19 
 
 
545 aa  542  1e-153  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  60.08 
 
 
526 aa  537  1e-151  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  60.15 
 
 
598 aa  534  1e-150  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  58.8 
 
 
549 aa  534  1e-150  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  53.86 
 
 
585 aa  527  1e-148  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  60.37 
 
 
512 aa  523  1e-147  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  60.71 
 
 
511 aa  521  1e-146  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  54.83 
 
 
519 aa  514  1e-144  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  53.47 
 
 
519 aa  506  9.999999999999999e-143  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  53.86 
 
 
519 aa  497  1e-139  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  56.67 
 
 
513 aa  496  1e-139  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.9 
 
 
513 aa  489  1e-137  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
513 aa  489  1e-137  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  54.63 
 
 
518 aa  477  1e-133  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  53 
 
 
618 aa  473  1e-132  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
513 aa  470  1.0000000000000001e-131  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
621 aa  469  1.0000000000000001e-131  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  54.16 
 
 
629 aa  466  9.999999999999999e-131  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  51.26 
 
 
514 aa  468  9.999999999999999e-131  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  50 
 
 
513 aa  458  9.999999999999999e-129  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
515 aa  452  1.0000000000000001e-126  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  49.9 
 
 
517 aa  448  1e-125  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  49.03 
 
 
513 aa  450  1e-125  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  49.9 
 
 
517 aa  448  1.0000000000000001e-124  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  52.23 
 
 
542 aa  443  1e-123  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
541 aa  445  1e-123  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
541 aa  445  1e-123  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
517 aa  437  1e-121  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
517 aa  436  1e-121  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
517 aa  436  1e-121  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  49.13 
 
 
517 aa  438  1e-121  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
518 aa  434  1e-120  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  47.21 
 
 
544 aa  434  1e-120  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  47.97 
 
 
517 aa  427  1e-118  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  50.62 
 
 
587 aa  427  1e-118  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.19 
 
 
566 aa  423  1e-117  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.03 
 
 
532 aa  420  1e-116  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
542 aa  419  1e-116  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
519 aa  419  1e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
585 aa  418  9.999999999999999e-116  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  50.62 
 
 
482 aa  418  9.999999999999999e-116  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  48.87 
 
 
541 aa  417  9.999999999999999e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  49.04 
 
 
518 aa  412  1e-114  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  52.15 
 
 
464 aa  414  1e-114  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.59 
 
 
579 aa  412  1e-113  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  45.11 
 
 
545 aa  410  1e-113  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  46.4 
 
 
598 aa  406  1.0000000000000001e-112  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  71.21 
 
 
613 aa  399  9.999999999999999e-111  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  45.2 
 
 
524 aa  392  1e-108  Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  68.94 
 
 
594 aa  391  1e-107  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  44.79 
 
 
521 aa  390  1e-107  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  44.79 
 
 
521 aa  390  1e-107  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  44.79 
 
 
521 aa  390  1e-107  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.24 
 
 
584 aa  387  1e-106  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.88 
 
 
564 aa  385  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.85 
 
 
512 aa  388  1e-106  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  46.44 
 
 
584 aa  380  1e-104  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.69 
 
 
529 aa  379  1e-103  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  46.27 
 
 
485 aa  375  1e-102  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.84 
 
 
517 aa  372  1e-102  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  68.08 
 
 
558 aa  375  1e-102  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.71 
 
 
519 aa  374  1e-102  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  46.27 
 
 
485 aa  375  1e-102  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  63.86 
 
 
573 aa  374  1e-102  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.32 
 
 
519 aa  372  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  64.61 
 
 
589 aa  369  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  64.9 
 
 
551 aa  365  1e-100  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  61.95 
 
 
579 aa  368  1e-100  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  58.14 
 
 
573 aa  367  1e-100  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_012560  Avin_24360  chemotaxis sensory transducer  42.83 
 
 
544 aa  365  1e-99  Azotobacter vinelandii DJ  Bacteria  normal  0.249262  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  62.42 
 
 
584 aa  365  2e-99  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  67.76 
 
 
634 aa  362  1e-98  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  67.76 
 
 
634 aa  362  1e-98  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  62.13 
 
 
513 aa  360  4e-98  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  63.06 
 
 
580 aa  357  1.9999999999999998e-97  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  62.87 
 
 
578 aa  358  1.9999999999999998e-97  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  47.33 
 
 
456 aa  355  7.999999999999999e-97  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  68.98 
 
 
615 aa  355  1e-96  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  68.98 
 
 
615 aa  355  1e-96  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  62.83 
 
 
579 aa  354  2e-96  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  60.87 
 
 
532 aa  352  1e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  70.03 
 
 
513 aa  350  3e-95  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  65.15 
 
 
553 aa  350  4e-95  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
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